OB01G38450 (Oryza brachyantha)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OB01G38450 T254884_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB01G38450.1 MADS box 10 57

Links

Other MADS box family TFs
Other Oryza brachyantha TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA01G33710 Oryza nivara ONIVA01G33710 N 1.000
OGLUM01G33550 Oryza glumaepatula OGLUM01G33550 N 1.000
OBART01G29490 Oryza barthii OBART01G29490 N 1.000
OPUNC01G29290 Oryza punctata OPUNC01G29290 N 1.000
ORGLA01G0242900 Oryza glaberrima ORGLA01G0242900 N 1.000
MADS32 Oryza sativa OS01G0726400 N 1.000
BGIOSGA000892 Oryza indica BGIOSGA000892 N 1.000
LPERR01G25340 Leersia perrieri LPERR01G25340 N 1.000
ORUFI01G32600 Oryza rufipogon ORUFI01G32600 N 1.000
BRADI2G48690 Brachypodium distachyon BRADI2G48690 N 0.979
Traes_3AL_219064574 Triticum aestivum Traes_3AL_219064574 N 0.938
TRAES3BF048900050CFD_g Triticum aestivum TRAES3BF048900050CFD_g N 0.938
GRMZM2G079727 Zea mays GRMZM2G079727 N 0.938
F775_28377 Aegilops tauschii F775_28377 N 0.938
MLOC_80902 Hordeum vulgare MLOC_80902 N 0.938
Sb03g033380 Sorghum bicolor Sb03g033380 N 0.917
Pavir.Eb02653 Panicum virgatum Pavir.Eb02653 N 0.917
Si002988m.g Setaria italica Si002988m.g N 0.917
Pavir.Ea02667 Panicum virgatum Pavir.Ea02667 N 0.917
GRMZM2G001139 Zea mays GRMZM2G001139 N 0.917
GSMUA_Achr9G05780_001 Musa acuminata GSMUA_Achr9G05780_001 N 0.896
PDK_20s13009472g001 Phoenix dactylifera PDK_20s13009472g001 N 0.875
Cla002664 Citrullus lanatus Cla002664 I 0.708
mgf006616m Mimulus guttatus mgf006616m I 0.708
Cucsa.392160 Cucumis sativus Cucsa.392160 I 0.708
Pavir.Da01333 Panicum virgatum Pavir.Da01333 I 0.708
Traes_7DS_05F0F0B64 Triticum aestivum Traes_7DS_05F0F0B64 I 0.708
Si007641m.g Setaria italica Si007641m.g I 0.708
F775_25533 Aegilops tauschii F775_25533 I 0.708
Q40172_SOLLC Solanum lycopersicum Q40172_SOLLC I 0.708
Solyc03g019710.2 Solanum lycopersicum Solyc03g019710.2 I 0.708
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.707
OB08G11080 Oryza brachyantha OB08G11080 I 0.702
F775_26271 Aegilops tauschii F775_26271 I 0.702
MLOC_53973 Hordeum vulgare MLOC_53973 I 0.702
LPERR08G01250 Leersia perrieri LPERR08G01250 I 0.702
GSMUA_Achr11G19350_001 Musa acuminata GSMUA_Achr11G19350_001 I 0.702
OPUNC08G01030 Oryza punctata OPUNC08G01030 I 0.702
Traes_7AL_67921A952 Triticum aestivum Traes_7AL_67921A952 I 0.702
Traes_7BL_9BCF391CF Triticum aestivum Traes_7BL_9BCF391CF I 0.702
TRIUR3_13653 Triticum urartu TRIUR3_13653 I 0.702
Traes_7DL_CAF83263E Triticum aestivum Traes_7DL_CAF83263E I 0.702
Traes_7AS_360247894 Triticum aestivum Traes_7AS_360247894 I 0.700
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.700