CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB01G49780
(
Oryza brachyantha
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OB01G49780
T254887_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB01G49780.1
MADS box
34
84
LIENEKKRKATYKNRRDGLVQKVSQFSTLCGVDAFLVCFGPAAAGGEVTTW
Links
Other
MADS box
family TFs
Other
Oryza brachyantha
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB07G14520
Oryza brachyantha
OB07G14520
N
1.000
LPERR01G35620
Leersia perrieri
LPERR01G35620
N
0.917
OPUNC01G39870
Oryza punctata
OPUNC01G39870
N
0.854
ONIVA01G46080
Oryza nivara
ONIVA01G46080
N
0.833
BGIOSGA000297
Oryza indica
BGIOSGA000297
N
0.833
ORUFI01G44370
Oryza rufipogon
ORUFI01G44370
N
0.833
ORGLA01G0349700
Oryza glaberrima
ORGLA01G0349700
N
0.833
OMERI01G38050
Oryza meridionalis
OMERI01G38050
N
0.833
OGLUM01G45230
Oryza glumaepatula
OGLUM01G45230
N
0.833
OBART01G41060
Oryza barthii
OBART01G41060
N
0.833
OLONG_004132
Oryza longistaminata
OLONG_004132
N
0.791
Si039273m.g
Setaria italica
Si039273m.g
N
0.773
Pavir.Eb00786
Panicum virgatum
Pavir.Eb00786
N
0.767
Pavir.Ea00977
Panicum virgatum
Pavir.Ea00977
N
0.750
LPERR08G19020
Leersia perrieri
LPERR08G19020
N
0.708