CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART04G13770
(
Oryza barthii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OBART04G13770
T254976_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL12
M10906_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL12_01
0.854
0.854
MADS26
M10974_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS26_01
0.771
0.771
Q9ATE9_PETHY
M11012_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP20_01
0.729
0.729
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.729
0.729
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.729
0.729
MADS50
M10968_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS50_01
0.729
0.729
MLOC_61901
M10964_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM8_01
0.708
0.708
Q40882_PETHY
M11003_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP11_01
0.708
0.708
Q9FR84_MAIZE
M10981_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_03
0.708
0.708
Q41829_MAIZE
M10977_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_02
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART04G13770.1
MADS box
10
57
RIENPVHRQVTFCKRRMGLLKKAKELSVLCDADIGVVVFSPHGKIYEL
Links
Other
MADS box
family TFs
Other
Oryza barthii
TFs
255 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
repo
Drosophila melanogaster
FBgn0011701
D
0.000
PPAI009709
Phlebotomus papatasi
PPAI009709
I
0.000
LLOJ008217
Lutzomyia longipalpis
LLOJ008217
I
0.000
LLOJ004353
Lutzomyia longipalpis
LLOJ004353
I
0.000
BGLB003458
Biomphalaria glabrata
BGLB003458
I
0.000
ASTEI04375
Anopheles stephensi
ASTEI04375
I
0.000
ASIS022368
Anopheles sinensis
ASIS022368
I
0.000
ASIS004766
Anopheles sinensis
ASIS004766
I
0.000
AQUA001638
Anopheles quadriannulatus
AQUA001638
I
0.000
AMIN000180
Anopheles minimus
AMIN000180
I
0.000
ALUE_0001238401
Ascaris lumbricoides
ALUE_0001238401
I
0.000
ACAC_0000394201
Angiostrongylus cantonensis
ACAC_0000394201
I
0.000
ALUE_0001765001
Ascaris lumbricoides
ALUE_0001765001
I
0.000
augustus_masked-nMf.1.1.scaf12078-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12078-processed-gene-0.0
I
0.000
augustus_masked-nMf.1.1.scaf00990-processed-gene-0.2
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00990-processed-gene-0.2
I
0.000
ASIM_0001653501
Anisakis simplex
ASIM_0001653501
I
0.000
ASIM_0001502101
Anisakis simplex
ASIM_0001502101
I
0.000
ASIM_0000400001
Anisakis simplex
ASIM_0000400001
I
0.000
ANCDUO_14705
Ancylostoma duodenale
ANCDUO_14705
I
0.000
ANCDUO_02875
Ancylostoma duodenale
ANCDUO_02875
I
0.000
ANCCEY_05038
Ancylostoma ceylanicum
ANCCEY_05038
I
0.000
AMAM011118
Anopheles maculatus
AMAM011118
I
0.000
AFUN000238
Anopheles funestus
AFUN000238
I
0.000
LCUP015975
Lucilia cuprina
LCUP015975
I
0.000
LCUP006106
Lucilia cuprina
LCUP006106
I
0.000
HHAL000577-PA
Halyomorpha halys
HHAL000577-PA
I
0.000
CLEC009854
Cimex lectularius
CLEC009854
I
0.000
CLEC007879
Cimex lectularius
CLEC007879
I
0.000
Sakowv30043910m.g
Saccoglossus kowalevskii
Sakowv30043910m.g
I
0.000
Sakowv30020657m.g
Saccoglossus kowalevskii
Sakowv30020657m.g
I
0.000
e_gw.549.21.1
Branchiostoma floridae
e_gw.549.21.1
I
0.000
Hsal_15570--XP_393635.1_APIME
Harpegnathos saltator
Hsal_15570--XP_393635.1_APIME
I
0.000
LDEC020561
Leptinotarsa decemlineata
LDEC020561
I
0.000
Minc03173
Meloidogyne incognita
Minc03173
I
0.000
AFAF006008
Anopheles farauti
AFAF006008
I
0.000
AEPI009754
Anopheles epiroticus
AEPI009754
I
0.000
ADIR008499
Anopheles dirus
ADIR008499
I
0.000
ACUA028387
Anopheles culicifacies
ACUA028387
I
0.000
ACUA020936
Anopheles culicifacies
ACUA020936
I
0.000
ACOM034313
Anopheles coluzzii
ACOM034313
I
0.000
AATE009495
Anopheles atroparvus
AATE009495
I
0.000
AARA006634
Anopheles arabiensis
AARA006634
I
0.000
AALB009693
Anopheles albimanus
AALB009693
I
0.000
Cflo_05070--XP_393635.1_APIME
Camponotus floridanus
Cflo_05070--XP_393635.1_APIME
I
0.000
BTMF_0000584401
Brugia timori
BTMF_0000584401
I
0.000
TsM_000296500
Taenia solium
TsM_000296500
I
0.000
SCUD_0000812901
Schistosoma curassoni
SCUD_0000812901
I
0.000
PXEA_0002510601
Protopolystoma xenopodis
PXEA_0002510601
I
0.000
PXEA_0001895501
Protopolystoma xenopodis
PXEA_0001895501
I
0.000
PXEA_0001255201
Protopolystoma xenopodis
PXEA_0001255201
I
0.000
PEQ_0001172001
Parascaris equorum
PEQ_0001172001
I
0.000
PEQ_0000367601
Parascaris equorum
PEQ_0000367601
I
0.000
OFLC_0001568801
Onchocerca flexuosa
OFLC_0001568801
I
0.000
OFLC_0000069201
Onchocerca flexuosa
OFLC_0000069201
I
0.000
SCUD_0001719701
Schistosoma curassoni
SCUD_0001719701
I
0.000
SMTD_0002280601
Schistosoma mattheei
SMTD_0002280601
I
0.000
SROB_0000014301
Schistosoma rodhaini
SROB_0000014301
I
0.000
TRE_0000860801
Trichobilharzia regenti
TRE_0000860801
I
0.000
TELCIR_07155
Teladorsagia circumcincta
TELCIR_07155
I
0.000
TCNE_0001765901
Toxocara canis
TCNE_0001765901
I
0.000
TCLT_0000599001
Thelazia callipaeda
TCLT_0000599001
I
0.000
TCLT_0000305201
Thelazia callipaeda
TCLT_0000305201
I
0.000
TASK_0000431401
Taenia asiatica
TASK_0000431401
I
0.000
T265_01068
Opisthorchis viverrini
T265_01068
I
0.000
SROB_0001108301
Schistosoma rodhaini
SROB_0001108301
I
0.000
nRc.2.0.1.g34717
Romanomermis culicivorax
nRc.2.0.1.g34717
I
0.000
nOo.2.0.1.g01207
Onchocerca ochengi
nOo.2.0.1.g01207
I
0.000
nOo.2.0.1.g00955
Onchocerca ochengi
nOo.2.0.1.g00955
I
0.000
EVEC_0000662001
Enterobius vermicularis
EVEC_0000662001
I
0.000
EEL_0000392901
Elaeophora elaphi
EEL_0000392901
I
0.000
DME_0001008101
Dracunculus medinensis
DME_0001008101
I
0.000
DME_0000365001
Dracunculus medinensis
DME_0000365001
I
0.000
DILT_0000923301
Diphyllobothrium latum
DILT_0000923301
I
0.000
DILT_0000634101
Diphyllobothrium latum
DILT_0000634101
I
0.000
CGOC_0000550601
Cylicostephanus goldi
CGOC_0000550601
I
0.000
C_01032
Schistosoma haematobium
C_01032
I
0.000
EVEC_0001353201
Enterobius vermicularis
EVEC_0001353201
I
0.000
GPUH_0000001901
Gongylonema pulchrum
GPUH_0000001901
I
0.000
GPUH_0002067401
Gongylonema pulchrum
GPUH_0002067401
I
0.000
nLs.2.1.2.g00296
Litomosoides sigmodontis
nLs.2.1.2.g00296
I
0.000
NECAME_15973
Necator americanus
NECAME_15973
I
0.000
NBR_0000568501
Nippostrongylus brasiliensis
NBR_0000568501
I
0.000
nAv.1.0.1.g03166
Acanthocheilonema viteae
nAv.1.0.1.g03166
I
0.000
maker-nMf.1.1.scaf04426-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf04426-augustus-gene-0.4
I
0.000
maker-nMf.1.1.scaf00145-augustus-gene-0.13
Meloidogyne floridensis
maker-nMf.1.1.scaf00145-augustus-gene-0.13
I
0.000
L893_g26530
Steinernema glaseri
L893_g26530
I
0.000
Hba_17613
Heterorhabditis bacteriophora
Hba_17613
I
0.000
C_01031
Schistosoma haematobium
C_01031
I
0.000
Alligator_sinensis_CCG007467.1
Alligator sinensis
Alligator_sinensis_CCG007467.1
I
0.000
GI24758
Drosophila mojavensis
FBgn0147480
I
0.000
HOXC4
Procavia capensis
ENSPCAG00000011039
I
0.000
ENSPANG00000025837
Papio anubis
ENSPANG00000025837
I
0.000
ENSORLG00000012370
Oryzias latipes
ENSORLG00000012370
I
0.000
ENSOARG00000018096
Ovis aries
ENSOARG00000018096
I
0.000
ENSMPUG00000006459
Mustela putorius furo
ENSMPUG00000006459
I
0.000
BARHL2
Monodelphis domestica
ENSMODG00000012056
I
0.000
ENSMGAG00000015339
Meleagris gallopavo
ENSMGAG00000015339
I
0.000
ENSMGAG00000006701
Meleagris gallopavo
ENSMGAG00000006701
I
0.000
ENSGMOG00000015411
Gadus morhua
ENSGMOG00000015411
I
0.000
ENSPFOG00000017586
Poecilia formosa
ENSPFOG00000017586
I
0.000
ENSPFOG00000024523
Poecilia formosa
ENSPFOG00000024523
I
0.000
GH18559
Drosophila grimshawi
FBgn0126026
I
0.000
GG22770
Drosophila erecta
FBgn0114935
I
0.000
GF23072
Drosophila ananassae
FBgn0100066
I
0.000
GA16115
Drosophila pseudoobscura
FBgn0076131
I
0.000
BARHL2
Vicugna pacos
ENSVPAG00000005913
I
0.000
ENSTSYG00000012674
Tarsius syrichta
ENSTSYG00000012674
I
0.000
OTP
Pteropus vampyrus
ENSPVAG00000011630
I
0.000
NKX1-1
Pan troglodytes
ENSPTRG00000041220
I
0.000
ENSPSIG00000005438
Pelodiscus sinensis
ENSPSIG00000005438
I
0.000
ENSGMOG00000006424
Gadus morhua
ENSGMOG00000006424
I
0.000
ENSGGOG00000027271
Gorilla gorilla
ENSGGOG00000027271
I
0.000
CGI_10009942
Crassostrea gigas
CGI_10009942
I
0.000
CapteG80769
Capitella teleta
CapteG80769
I
0.000
CapteG30874
Capitella teleta
CapteG30874
I
0.000
BGIBMGA007802
Bombyx mori
BGIBMGA007802
I
0.000
Aqu1.218592
Amphimedon queenslandica
Aqu1.218592
I
0.000
AGAP003574
Anopheles gambiae
AGAP003574
I
0.000
ACYPI34506
Acyrthosiphon pisum
ACYPI34506
I
0.000
WUBG_02861
Wuchereria bancrofti
WUBG_02861
I
0.000
WUBG_01783
Wuchereria bancrofti
WUBG_01783
I
0.000
CGI_10015407
Crassostrea gigas
CGI_10015407
I
0.000
CPIJ010424
Culex quinquefasciatus
CPIJ010424
I
0.000
ALX1
Gorilla gorilla
ENSGGOG00000000168
I
0.000
ENSGACG00000020715
Gasterosteus aculeatus
ENSGACG00000020715
I
0.000
BARHL1
Felis catus
ENSFCAG00000007105
I
0.000
TLX3
Dasypus novemcinctus
ENSDNOG00000011151
I
0.000
PDX1
Dasypus novemcinctus
ENSDNOG00000003213
I
0.000
MEOX1
Bos taurus
ENSBTAG00000015751
I
0.000
ENSAPLG00000003977
Anas platyrhynchos
ENSAPLG00000003977
I
0.000
DAPPUDRAFT_55144
Daphnia pulex
DAPPUDRAFT_55144
I
0.000
DAPPUDRAFT_347554
Daphnia pulex
DAPPUDRAFT_347554
I
0.000
CpipJ_CPIJ010424
Culex pipiens
CpipJ_CPIJ010424
I
0.000
GL12006
Drosophila persimilis
FBgn0149614
I
0.000
Afo_R001648
Aptenodytes forsteri
Afo_R001648
I
0.000
NEMVEDRAFT_v1g93991
Nematostella vectensis
NEMVEDRAFT_v1g93991
I
0.000
NV16195
Nasonia vitripennis
NV16195
I
0.000
PHUM165720
Pediculus humanus
PHUM165720
I
0.000
RPRC005801
Rhodnius prolixus
RPRC005801
I
0.000
SINV18014
Solenopsis invicta
SINV18014
I
0.000
SINV21122
Solenopsis invicta
SINV21122
I
0.000
SMAR006755
Strigamia maritima
SMAR006755
I
0.000
Smp_125600
Schistosoma mansoni
Smp_125600
I
0.000
Smp_165410
Schistosoma mansoni
Smp_165410
I
0.000
Smp_189380
Schistosoma mansoni
Smp_189380
I
0.000
TC013309
Tribolium castaneum
TC013309
I
0.000
tetur14g02380
Tetranychus urticae
tetur14g02380
I
0.000
TriadG9432
Trichoplax adhaerens
TriadG9432
I
0.000
WBGene00242173
Onchocerca volvulus
WBGene00242173
I
0.000
WBGene00245266
Onchocerca volvulus
WBGene00245266
I
0.000
YQE_05070
Dendroctonus ponderosae
YQE_05070
I
0.000
Aan_R000875
Calypte anna
Aan_R000875
I
0.000
NEMVEDRAFT_v1g49015
Nematostella vectensis
NEMVEDRAFT_v1g49015
I
0.000
NEMVEDRAFT_v1g48953
Nematostella vectensis
NEMVEDRAFT_v1g48953
I
0.000
MESCA011262
Megaselia scalaris
MESCA011262
I
0.000
L798_01064
Zootermopsis nevadensis
L798_01064
I
0.000
KGM_12590
Danaus plexippus
KGM_12590
I
0.000
KGM_02204
Danaus plexippus
KGM_02204
I
0.000
ISCW024267
Ixodes scapularis
ISCW024267
I
0.000
GB54432
Apis mellifera
GB54432
I
0.000
GE25524
Drosophila yakuba
FBgn0242590
I
0.000
GK22387
Drosophila willistoni
FBgn0224366
I
0.000
GJ22545
Drosophila virilis
FBgn0209652
I
0.000
GD19218
Drosophila simulans
FBgn0190723
I
0.000
LOAG_02387
Loa loa
LOAG_02387
I
0.000
GM15291
Drosophila sechellia
FBgn0170211
I
0.000
LotgiG120200
Lottia gigantea
LotgiG120200
I
0.000
MCINX000309
Melitaea cinxia
MCINX000309
I
0.000
MESCA003890
Megaselia scalaris
MESCA003890
I
0.000
CLEC000966
Cimex lectularius
CLEC000966
N
0.000
AMEC003288
Anopheles melas
AMEC003288
N
0.000
WUBG_03794
Wuchereria bancrofti
WUBG_03794
N
0.000
ENSGMOG00000011340
Gadus morhua
ENSGMOG00000011340
N
0.000
Cmyd_10002827
Chelonia mydas
Cmyd_10002827
N
0.000
BGIBMGA010035
Bombyx mori
BGIBMGA010035
N
0.000
FOMPIDRAFT_1062989
Fomitopsis pinicola
FOMPIDRAFT_1062989
N
0.000
CapteG71005
Capitella teleta
CapteG71005
N
0.000
ACHR010176
Anopheles christyi
ACHR010176
N
0.000
LCUP002254
Lucilia cuprina
LCUP002254
N
0.000
SCLCIDRAFT_964190
Scleroderma citrinum
SCLCIDRAFT_964190
N
0.000
LOAG_17577
Loa loa
LOAG_17577
N
0.000
ASIS018158
Anopheles sinensis
ASIS018158
N
0.000
PEQ_0000006101
Parascaris equorum
PEQ_0000006101
N
0.000
PEQ_0000070601
Parascaris equorum
PEQ_0000070601
N
0.000