CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM11G21110
(
Oryza glumaepatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OGLUM11G21110
T255080_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM11G21110.1
MADS box
10
55
KLENSSGRHVTYSKRRSGILKKAKELSILCDIPLILLMFSPNGKPT
Links
Other
MADS box
family TFs
Other
Oryza glumaepatula
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_008007
Oryza longistaminata
OLONG_008007
N
1.000
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
0.978
OBART11G21780
Oryza barthii
OBART11G21780
N
0.978
ORGLA11G0175900
Oryza glaberrima
ORGLA11G0175900
N
0.978
OS11G0658700
Oryza sativa
OS11G0658700
N
0.978
OMERI11G18020
Oryza meridionalis
OMERI11G18020
N
0.957
LPERR11G18320
Leersia perrieri
LPERR11G18320
N
0.957
BGIOSGA035654
Oryza indica
BGIOSGA035654
N
0.957
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.935
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.935
OPUNC11G18320
Oryza punctata
OPUNC11G18320
N
0.935
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.913
BRADI4G11097
Brachypodium distachyon
BRADI4G11097
I
0.913
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.913
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.913
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.891
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.891
Si028357m.g
Setaria italica
Si028357m.g
N
0.891
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.891
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.891
F775_13266
Aegilops tauschii
F775_13266
I
0.891
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.848
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.826
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.826
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.826
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.826
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.826
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.804
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.804
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.804
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.792
Lus10034464.g
Linum usitatissimum
Lus10034464.g
I
0.783
TCM_014051
Theobroma cacao
TCM_014051
I
0.783
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.771
Gorai.008G194100
Gossypium raimondii
Gorai.008G194100
I
0.771
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.766
Lus10026613.g
Linum usitatissimum
Lus10026613.g
I
0.761
Lus10030450.g
Linum usitatissimum
Lus10030450.g
I
0.761
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.761
cassava46162.m1
Manihot esculenta
cassava46162.m1
I
0.761
gene26028-v1.0-hybrid
Fragaria vesca
gene26028-v1.0-hybrid
I
0.761
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.761
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.761
Bra031049
Brassica rapa
Bra031049
I
0.761
Bra016544
Brassica rapa
Bra016544
I
0.761
Lus10019089.g
Linum usitatissimum
Lus10019089.g
I
0.750
PK21701.1
Cannabis sativa
PK21701.1
I
0.750
30138.m004061
Ricinus communis
30138.m004061
I
0.750
Lus10037166.g
Linum usitatissimum
Lus10037166.g
N
0.739
SapurV1A.0149s0010
Salix purpurea
SapurV1A.0149s0010
N
0.739
Bo9g072860
Brassica oleracea
Bo9g072860
N
0.739
MDP0000193129
Malus domestica
MDP0000193129
I
0.739
cassava19791.m1
Manihot esculenta
cassava19791.m1
I
0.739
Pm024895
Prunus mume
Pm024895
I
0.739
Cla010361
Citrullus lanatus
Cla010361
I
0.739
PRUPE_ppa015857mg
Prunus persica
PRUPE_ppa015857mg
I
0.739
Bra025685
Brassica rapa
Bra025685
I
0.739
29813.m001508
Ricinus communis
29813.m001508
I
0.739
GSMUA_Achr11G14240_001
Musa acuminata
GSMUA_Achr11G14240_001
N
0.739
cassava17346.m1
Manihot esculenta
cassava17346.m1
I
0.739
TCM_011687
Theobroma cacao
TCM_011687
I
0.739
AGL65
Vitis vinifera
VIT_17s0000g06340
I
0.729
POPTR_0008s08780
Populus trichocarpa
POPTR_0008s08780
I
0.717
GLYMA20G04500
Glycine max
GLYMA20G04500
N
0.717
PK03147.1
Cannabis sativa
PK03147.1
I
0.717
Ca_16376
Cicer arietinum
Ca_16376
I
0.717
cassava12018.valid.m1
Manihot esculenta
cassava12018.valid.m1
I
0.717
Cucsa.284960
Cucumis sativus
Cucsa.284960
I
0.717
Lus10036761.g
Linum usitatissimum
Lus10036761.g
N
0.717
orange1.1g018825m.g
Citrus sinensis
orange1.1g018825m.g
I
0.717
Ciclev10031963m.g
Citrus clementina
Ciclev10031963m.g
I
0.717
Bra017404
Brassica rapa
Bra017404
I
0.717