CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_006912
(
Oryza longistaminata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OLONG_006912
T255114_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_006912-R1
MADS box
10
56
RIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHE
OLONG_006912-R1
MADS box
145
166
MQQEIQFLRNKEGILKAANEML
Links
Other
MADS box
family TFs
Other
Oryza longistaminata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC12G05650
Oryza punctata
OPUNC12G05650
N
1.000
ORGLA12G0056300
Oryza glaberrima
ORGLA12G0056300
N
0.986
ORUFI12G06790
Oryza rufipogon
ORUFI12G06790
N
0.986
MADS33
Oryza sativa
OS12G0206800
N
0.986
ONIVA12G05620
Oryza nivara
ONIVA12G05620
N
0.986
OMERI12G04030
Oryza meridionalis
OMERI12G04030
N
0.986
BGIOSGA036463
Oryza indica
BGIOSGA036463
N
0.986
OBART12G05930
Oryza barthii
OBART12G05930
N
0.986
OGLUM12G07130
Oryza glumaepatula
OGLUM12G07130
N
0.986
LPERR12G05220
Leersia perrieri
LPERR12G05220
N
0.971
OB12G15640
Oryza brachyantha
OB12G15640
N
0.926