OLONG_008007 (Oryza longistaminata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OLONG_008007 T255116_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_008007-R1 MADS box 10 55

Links

Other MADS box family TFs
Other Oryza longistaminata TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.848
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.792
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.717
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.804
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.717
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.761
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.739
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.739
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.717
30138.m004061 Ricinus communis 30138.m004061 I 0.750
29813.m001508 Ricinus communis 29813.m001508 I 0.739
Pm024895 Prunus mume Pm024895 I 0.739
Cla010361 Citrullus lanatus Cla010361 I 0.739
Ca_16376 Cicer arietinum Ca_16376 I 0.717
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.729
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.891
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.761
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.771
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.913
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.826
PK21701.1 Cannabis sativa PK21701.1 I 0.750
PK03147.1 Cannabis sativa PK03147.1 I 0.717
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.804
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.761
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.935
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.935
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.717
MDP0000193129 Malus domestica MDP0000193129 I 0.739
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.783
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.761
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.761
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.750
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.771
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.891
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.891
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.891
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.826
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.766
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.826
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.826
F775_13266 Aegilops tauschii F775_13266 I 0.891
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.913
Bra031049 Brassica rapa Bra031049 I 0.761
Bra025685 Brassica rapa Bra025685 I 0.739
Bra017404 Brassica rapa Bra017404 I 0.717
Bra016544 Brassica rapa Bra016544 I 0.761
Bo8g104060 Brassica oleracea Bo8g104060 I 0.761
Bo8g068060 Brassica oleracea Bo8g068060 I 0.761
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.913
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.826
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.804
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.717
TCM_014051 Theobroma cacao TCM_014051 I 0.783
TCM_011687 Theobroma cacao TCM_011687 I 0.739
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.739
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.913
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.739
Si028357m.g Setaria italica Si028357m.g N 0.891
Bo9g072860 Brassica oleracea Bo9g072860 N 0.739
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.957
OS11G0658700 Oryza sativa OS11G0658700 N 0.978
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.978
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.957
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 1.000
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.957
GSMUA_Achr11G14240_001 Musa acuminata GSMUA_Achr11G14240_001 N 0.739
OPUNC11G18320 Oryza punctata OPUNC11G18320 N 0.935
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.717
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.978
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.717
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.739
OBART11G21780 Oryza barthii OBART11G21780 N 0.978