OLONG_021245 (Oryza longistaminata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OLONG_021245 T255142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_021245-R1 MADS box 10 57
OLONG_021245-R2 MADS box 10 57

Links

Other MADS box family TFs
Other Oryza longistaminata TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.979
MADS31 Oryza sativa OS04G0614100 I 0.979
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.979
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.979
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.979
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.979
OBART04G25610 Oryza barthii OBART04G25610 I 0.979
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.979
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.958
OB04G32080 Oryza brachyantha OB04G32080 I 0.938
Pavir.Gb00526 Panicum virgatum Pavir.Gb00526 I 0.917
GRMZM2G005155 Zea mays GRMZM2G005155 I 0.896
Pavir.Ga00461 Panicum virgatum Pavir.Ga00461 I 0.896
GRMZM2G135018 Zea mays GRMZM2G135018 I 0.896
TRIUR3_18402 Triticum urartu TRIUR3_18402 I 0.896
F775_05654 Aegilops tauschii F775_05654 I 0.896
Sb06g028420 Sorghum bicolor Sb06g028420 I 0.896
Traes_2AL_8DF89AA72 Triticum aestivum Traes_2AL_8DF89AA72 I 0.896
Traes_2DL_6CD5A5CD9 Triticum aestivum Traes_2DL_6CD5A5CD9 I 0.896
MLOC_12133 Hordeum vulgare MLOC_12133 I 0.896
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.875
AC233912.1_FG001 Zea mays AC233912.1_FG001 I 0.875
GRMZM2G128953 Zea mays GRMZM2G128953 I 0.875
GRMZM2G148220 Zea mays GRMZM2G148220 N 0.854
GRMZM2G446426 Zea mays GRMZM2G446426 N 0.833
GRMZM2G137387 Zea mays GRMZM2G137387 I 0.833
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.833
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I 0.833
OB02G14670 Oryza brachyantha OB02G14670 I 0.771
M17_MAIZE Zea mays M17_MAIZE D 0.771
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I 0.771
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.771
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.771
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.771
MADS29 Oryza sativa OS02G0170300 I 0.771
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.771
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I 0.771
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.771
Si018183m.g Setaria italica Si018183m.g I 0.771
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.771
OBART02G05380 Oryza barthii OBART02G05380 I 0.771
Sb04g004736 Sorghum bicolor Sb04g004736 I 0.771
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.771
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.771
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.771
GRMZM2G130382 Zea mays GRMZM2G130382 I 0.750
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.750
F775_30836 Aegilops tauschii F775_30836 I 0.750
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.750
GLYMA08G06991 Glycine max GLYMA08G06991 I 0.750
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.750
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.750
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.750
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.750
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.750
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.750
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.750
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.750
BGIOSGA015021 Oryza indica BGIOSGA015021 I 0.745
OB04G21020 Oryza brachyantha OB04G21020 I 0.745
PK27158.1 Cannabis sativa PK27158.1 I 0.743
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.737
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I 0.729
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.729
OS06G0347700 Oryza sativa OS06G0347700 I 0.729
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.729
AGL15 Populus trichocarpa POPTR_0009s06060 I 0.729
Solyc01g106170.2 Solanum lycopersicum Solyc01g106170.2 I 0.729
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I 0.729
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I 0.729
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I 0.729
Traes_5DS_82FA431DB Triticum aestivum Traes_5DS_82FA431DB I 0.729
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.729
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.729
Ca_19854 Cicer arietinum Ca_19854 I 0.729
Cla023427 Citrullus lanatus Cla023427 I 0.729
cassava9889.m1 Manihot esculenta cassava9889.m1 I 0.729
TT16 Vitis vinifera VIT_01s0011g01560 I 0.729
gene29503-v1.0-hybrid Fragaria vesca gene29503-v1.0-hybrid I 0.729
TCM_024579 Theobroma cacao TCM_024579 I 0.729
LPERR04G10680 Leersia perrieri LPERR04G10680 I 0.729
ORUFI04G15060 Oryza rufipogon ORUFI04G15060 I 0.729
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I 0.729
TCM_007713 Theobroma cacao TCM_007713 I 0.729
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.729
OGLUM04G13550 Oryza glumaepatula OGLUM04G13550 I 0.729
SapurV1A.0027s0860 Salix purpurea SapurV1A.0027s0860 I 0.729
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.729
ONIVA04G12010 Oryza nivara ONIVA04G12010 I 0.729
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.729
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.729
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.729
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.729
OLONG_023630 Oryza longistaminata OLONG_023630 I 0.729
OMERI04G12400 Oryza meridionalis OMERI04G12400 I 0.729
ORUFI04G15040 Oryza rufipogon ORUFI04G15040 I 0.729
OMERI04G12420 Oryza meridionalis OMERI04G12420 I 0.729
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I 0.729
F775_15097 Aegilops tauschii F775_15097 I 0.729
OBART04G13800 Oryza barthii OBART04G13800 I 0.729
chr6.CM0055.180.nc Lotus japonicus chr6.CM0055.180.nc I 0.729
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.729
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I 0.729
OBART06G14060 Oryza barthii OBART06G14060 I 0.729
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.729
LjSGA_019451.1 Lotus japonicus LjSGA_019451.1 I 0.729
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.729
Traes_7DS_7F8C88C92 Triticum aestivum Traes_7DS_7F8C88C92 I 0.723
F775_15098 Aegilops tauschii F775_15098 I 0.723
Thhalv10005641m.g Eutrema salsugineum Thhalv10005641m.g I 0.708
Ciclev10032489m.g Citrus clementina Ciclev10032489m.g I 0.708
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.708
PK19764.1 Cannabis sativa PK19764.1 I 0.708
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.708
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.708
Bostr.10199s0104 Boechera stricta Bostr.10199s0104 I 0.708
mgf025830m Mimulus guttatus mgf025830m I 0.708
estExt_fgenesh1_kg.C_260002 Physcomitrella patens estExt_fgenesh1_kg.C_260002 I 0.708
Cagra.4348s0011 Capsella grandiflora Cagra.4348s0011 I 0.708
PK28167.1 Cannabis sativa PK28167.1 I 0.708
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.708
Carubv10002792m.g Capsella rubella Carubv10002792m.g I 0.708
PK11571.1 Cannabis sativa PK11571.1 I 0.708
gene26429-v1.0-hybrid Fragaria vesca gene26429-v1.0-hybrid I 0.708
PK08595.1 Cannabis sativa PK08595.1 I 0.708
Gorai.012G134200 Gossypium raimondii Gorai.012G134200 I 0.708
MDP0000268317 Malus domestica MDP0000268317 I 0.708
MDP0000228942 Malus domestica MDP0000228942 I 0.708
MDP0000144516 Malus domestica MDP0000144516 I 0.708
orange1.1g036652m.g Citrus sinensis orange1.1g036652m.g I 0.708
e_gw1.209.37.1 Physcomitrella patens e_gw1.209.37.1 I 0.708
Pavir.Bb00065 Panicum virgatum Pavir.Bb00065 I 0.708
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.708
ANR1 Arabidopsis thaliana AT2G14210 I 0.708
MDP0000135652 Malus domestica MDP0000135652 I 0.708
Lus10042918.g Linum usitatissimum Lus10042918.g I 0.708
Gorai.007G360800 Gossypium raimondii Gorai.007G360800 I 0.708
SapurV1A.0103s0250 Salix purpurea SapurV1A.0103s0250 I 0.708
SapurV1A.0333s0300 Salix purpurea SapurV1A.0333s0300 I 0.708
Gorai.013G069000 Gossypium raimondii Gorai.013G069000 I 0.708
Lus10027404.g Linum usitatissimum Lus10027404.g I 0.708
Lus10031665.g Linum usitatissimum Lus10031665.g I 0.708
Lus10028214.g Linum usitatissimum Lus10028214.g I 0.708
SapurV1A.4660s0010 Salix purpurea SapurV1A.4660s0010 I 0.708
Traes_5AS_E9E60BA43 Triticum aestivum Traes_5AS_E9E60BA43 I 0.708
Bra014628 Brassica rapa Bra014628 I 0.708
F775_05799 Aegilops tauschii F775_05799 I 0.708
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I 0.708
TT16 Arabidopsis lyrata fgenesh2_kg.6__2319__AT5G23260.2 I 0.708
Bra011509 Brassica rapa Bra011509 I 0.708
Bo4g111230 Brassica oleracea Bo4g111230 I 0.708
e_gw1.171.4.1 Physcomitrella patens e_gw1.171.4.1 I 0.708
POPTR_0001s29100 Populus trichocarpa POPTR_0001s29100 I 0.708
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I 0.708
Bo2g161560 Brassica oleracea Bo2g161560 I 0.708
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.708
OGLUM04G13520 Oryza glumaepatula OGLUM04G13520 I 0.708
MTR_2g009890 Medicago truncatula MTR_2g009890 I 0.708
MTR_1g053070 Medicago truncatula MTR_1g053070 I 0.708
MTR_1g041615 Medicago truncatula MTR_1g041615 I 0.708
GSMUA_Achr7G12610_001 Musa acuminata GSMUA_Achr7G12610_001 I 0.708
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.708
GSMUA_Achr5G24560_001 Musa acuminata GSMUA_Achr5G24560_001 I 0.708
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.708
OBART04G13770 Oryza barthii OBART04G13770 I 0.708
OB06G22200 Oryza brachyantha OB06G22200 I 0.708
Bo1g007520 Brassica oleracea Bo1g007520 I 0.708
POPTR_0012s10190 Populus trichocarpa POPTR_0012s10190 I 0.708
GOA Vitis vinifera VIT_02s0025g02350 I 0.708
AGL18 Vitis vinifera VIT_08s0007g08790 I 0.708
VIT_00s0211g00180 Vitis vinifera VIT_00s0211g00180 I 0.708
VIT_00s0211g00150 Vitis vinifera VIT_00s0211g00150 I 0.708
TT16 Arabidopsis thaliana AT5G23260 I 0.708
TT16 Vitis vinifera VIT_10s0042g00820 I 0.708
30221.m002218 Ricinus communis 30221.m002218 I 0.708
cassava5692.m1 Manihot esculenta cassava5692.m1 I 0.708
cassava4651.m1 Manihot esculenta cassava4651.m1 I 0.708
cassava39185.m1 Manihot esculenta cassava39185.m1 I 0.708
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.708
Sb06g017660 Sorghum bicolor Sb06g017660 I 0.708
TRIUR3_09266 Triticum urartu TRIUR3_09266 I 0.708
TRIUR3_02252 Triticum urartu TRIUR3_02252 I 0.708
Solyc02g091550.1 Solanum lycopersicum Solyc02g091550.1 I 0.708
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I 0.708
Si003917m.g Setaria italica Si003917m.g I 0.708
Traes_2BL_E0978B1BC Triticum aestivum Traes_2BL_E0978B1BC I 0.708
Solyc12g088080.1 Solanum lycopersicum Solyc12g088080.1 I 0.708
Traes_2DL_71F120931 Triticum aestivum Traes_2DL_71F120931 I 0.708
GSMUA_Achr7G02960_001 Musa acuminata GSMUA_Achr7G02960_001 I 0.702
Si012632m.g Setaria italica Si012632m.g I 0.702
GRMZM2G069370 Zea mays GRMZM2G069370 I 0.702
Pavir.Gb01604 Panicum virgatum Pavir.Gb01604 I 0.702
BRADI5G11270 Brachypodium distachyon BRADI5G11270 I 0.702
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.700