CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI11G18020
(
Oryza meridionalis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OMERI11G18020
T255209_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI11G18020.1
MADS box
180
225
KLENSGGRHVTYSKRRSGILKKAKELSILCDIPLILLMFSPNDKPT
OMERI11G18020.2
MADS box
180
225
KLENSGGRHVTYSKRRSGILKKAKELSILCDIPLILLMFSPNDKPT
Links
Other
MADS box
family TFs
Other
Oryza meridionalis
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA11G0175900
Oryza glaberrima
ORGLA11G0175900
N
0.978
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
0.978
OS11G0658700
Oryza sativa
OS11G0658700
N
0.978
OBART11G21780
Oryza barthii
OBART11G21780
N
0.978
OPUNC11G18320
Oryza punctata
OPUNC11G18320
N
0.978
OLONG_008007
Oryza longistaminata
OLONG_008007
N
0.957
BGIOSGA035654
Oryza indica
BGIOSGA035654
N
0.957
LPERR11G18320
Leersia perrieri
LPERR11G18320
N
0.957
OGLUM11G21110
Oryza glumaepatula
OGLUM11G21110
N
0.957
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.891
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.891
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.870
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.870
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.870
Si028357m.g
Setaria italica
Si028357m.g
N
0.870
BRADI4G11097
Brachypodium distachyon
BRADI4G11097
I
0.870
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.848
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.848
F775_13266
Aegilops tauschii
F775_13266
I
0.848
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.848
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.848
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.826
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.826
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.804
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.783
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.783
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.783
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.783
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.783
Gorai.008G194100
Gossypium raimondii
Gorai.008G194100
I
0.761
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.761
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.761
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.761
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.761
Bra016544
Brassica rapa
Bra016544
I
0.761
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.761
Bra031049
Brassica rapa
Bra031049
I
0.761
gene26028-v1.0-hybrid
Fragaria vesca
gene26028-v1.0-hybrid
I
0.761
Lus10026613.g
Linum usitatissimum
Lus10026613.g
I
0.739
MDP0000193129
Malus domestica
MDP0000193129
I
0.739
Lus10034464.g
Linum usitatissimum
Lus10034464.g
I
0.739
Lus10030450.g
Linum usitatissimum
Lus10030450.g
I
0.739
Lus10019089.g
Linum usitatissimum
Lus10019089.g
I
0.739
TCM_014051
Theobroma cacao
TCM_014051
I
0.739
PRUPE_ppa015857mg
Prunus persica
PRUPE_ppa015857mg
I
0.739
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.739
Bra025685
Brassica rapa
Bra025685
I
0.739
Pm024895
Prunus mume
Pm024895
I
0.739
30138.m004061
Ricinus communis
30138.m004061
I
0.739
SapurV1A.0149s0010
Salix purpurea
SapurV1A.0149s0010
N
0.717
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.717
Bo9g072860
Brassica oleracea
Bo9g072860
N
0.717
GSMUA_Achr11G14240_001
Musa acuminata
GSMUA_Achr11G14240_001
N
0.717
TCM_011687
Theobroma cacao
TCM_011687
I
0.717
Cla010361
Citrullus lanatus
Cla010361
I
0.717
29813.m001508
Ricinus communis
29813.m001508
I
0.717
cassava46162.m1
Manihot esculenta
cassava46162.m1
I
0.717
Lus10037166.g
Linum usitatissimum
Lus10037166.g
N
0.717
AGL65
Vitis vinifera
VIT_17s0000g06340
I
0.717
cassava17346.m1
Manihot esculenta
cassava17346.m1
I
0.717
PK21701.1
Cannabis sativa
PK21701.1
I
0.708