CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA10G11850
(
Oryza nivara
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ONIVA10G11850
T255277_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA10G11850.1
MADS box
3
43
MEEDATYGKMQESLMEEARELSILCGVDVALLCAGGPGTGD
Links
Other
MADS box
family TFs
Other
Oryza nivara
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI01G15850
Oryza rufipogon
ORUFI01G15850
N
1.000
BGIOSGA003443
Oryza indica
BGIOSGA003443
N
1.000
OS01G0340400
Oryza sativa
OS01G0340400
N
1.000
OBART01G14260
Oryza barthii
OBART01G14260
N
0.974