OPUNC06G24880 (Oryza punctata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OPUNC06G24880 T255331_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MADS16
M10971_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS16_01
0.935 0.935
Q40513_TOBAC
M11001_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DEF_01
0.761 0.761
AP3
M08146_2.00
Arabidopsis thaliana
WDCCMAAARWRGHAA

TTDCYWYTTTKGGHW
ChIP-seq
Mathelier et al.(2014)
MA0556.1
0.739 0.739
AP3
M10919_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSB_Q2
0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC06G24880.1 MADS box 10 55

Links

Other MADS box family TFs
Other Oryza punctata TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCEY_01551 Ancylostoma ceylanicum ANCCEY_01551 N 0.000
ANCDUO_22594 Ancylostoma duodenale ANCDUO_22594 N 0.000
Bm4231 Brugia malayi Bm4231 N 0.000
CGOC_0000225401 Cylicostephanus goldi CGOC_0000225401 N 0.000
CJA39536 Caenorhabditis japonica CJA39536 N 0.000
DICVIV_08199 Dictyocaulus viviparus DICVIV_08199 N 0.000
HCOI02172800 Haemonchus contortus HCOI02172800 N 0.000
HPBE_0000579401 Heligmosomoides bakeri HPBE_0000579401 N 0.000
HPLM_0001137501 Haemonchus placei HPLM_0001137501 N 0.000
L596_g5643 Steinernema carpocapsae L596_g5643 N 0.000
L889_g32974 Steinernema feltiae L889_g32974 N 0.000
NECAME_01802 Necator americanus NECAME_01802 N 0.000
nOo.2.0.1.g01120 Onchocerca ochengi nOo.2.0.1.g01120 N 0.000
OESDEN_00032 Oesophagostomum dentatum OESDEN_00032 N 0.000
PTRK_0000436200 Parastrongyloides trichosuri PTRK_0000436200 N 0.000
SPAL_0000766800 Strongyloides papillosus SPAL_0000766800 N 0.000
TCLT_0000442401 Thelazia callipaeda TCLT_0000442401 N 0.000