OPUNC06G24880 (Oryza punctata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OPUNC06G24880 T255331_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MADS16
M10971_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS16_01
0.935 0.935
Q40513_TOBAC
M11001_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DEF_01
0.761 0.761
AP3
M08146_2.00
Arabidopsis thaliana
WDCCMAAARWRGHAA

TTDCYWYTTTKGGHW
ChIP-seq
Mathelier et al.(2014)
MA0556.1
0.739 0.739
AP3
M10919_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSB_Q2
0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC06G24880.1 MADS box 10 55

Links

Other MADS box family TFs
Other Oryza punctata TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSNLEG00000014917 Nomascus leucogenys ENSNLEG00000014917 I 0.000
TBX19 Canis familiaris ENSCAFG00000015268 I 0.000
SFT2D2 Macaca mulatta ENSMMUG00000005283 I 0.000
HMEL002424 Heliconius melpomene HMEL002424 N 0.000
MESCA010408 Megaselia scalaris MESCA010408 N 0.000
YQE_08215 Dendroctonus ponderosae YQE_08215 N 0.000
Aan_R005441 Calypte anna Aan_R005441 N 0.000
Myotis_brandtii_T_10014749 Myotis brandtii Myotis_brandtii_T_10014749 N 0.000
Ocbimv22020340m.g Octopus bimaculoides Ocbimv22020340m.g N 0.000
ENSPANG00000021432 Papio anubis ENSPANG00000021432 N 0.000
ACEP25258 Atta cephalotes ACEP25258 N 0.000
ENSMPUG00000006418 Mustela putorius furo ENSMPUG00000006418 N 0.000
T Myotis lucifugus ENSMLUG00000011294 N 0.000
T Microcebus murinus ENSMICG00000016122 N 0.000
ENSLACG00000008854 Latimeria chalumnae ENSLACG00000008854 N 0.000
ENSFALG00000012218 Ficedula albicollis ENSFALG00000012218 N 0.000
ENSAMXG00000005041 Astyanax mexicanus ENSAMXG00000005041 N 0.000
AFAF009298 Anopheles farauti AFAF009298 N 0.000