CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC11G18320
(
Oryza punctata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OPUNC11G18320
T255348_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC11G18320.1
MADS box
10
55
KLENSGGRHVTYSKRRSGILKKAKELSILCDVPLILLMFSPNDKPT
OPUNC11G18320.2
MADS box
10
55
KLENSGGRHVTYSKRRSGILKKAKELSILCDVPLILLMFSPNDKPT
Links
Other
MADS box
family TFs
Other
Oryza punctata
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI11G18020
Oryza meridionalis
OMERI11G18020
N
0.978
ORGLA11G0175900
Oryza glaberrima
ORGLA11G0175900
N
0.957
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
0.957
OBART11G21780
Oryza barthii
OBART11G21780
N
0.957
OS11G0658700
Oryza sativa
OS11G0658700
N
0.957
OGLUM11G21110
Oryza glumaepatula
OGLUM11G21110
N
0.935
OLONG_008007
Oryza longistaminata
OLONG_008007
N
0.935
LPERR11G18320
Leersia perrieri
LPERR11G18320
N
0.935
BGIOSGA035654
Oryza indica
BGIOSGA035654
N
0.935
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.851
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.851
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.848
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.848
Si028357m.g
Setaria italica
Si028357m.g
N
0.848
BRADI4G11097
Brachypodium distachyon
BRADI4G11097
I
0.848
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.848
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.826
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.826
F775_13266
Aegilops tauschii
F775_13266
I
0.826
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.826
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.826
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.804
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.787
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.771
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.766
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.761
Pm024895
Prunus mume
Pm024895
I
0.761
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.761
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.761
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.761
PRUPE_ppa015857mg
Prunus persica
PRUPE_ppa015857mg
I
0.761
gene26028-v1.0-hybrid
Fragaria vesca
gene26028-v1.0-hybrid
I
0.750
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.739
MDP0000193129
Malus domestica
MDP0000193129
I
0.729
Lus10026613.g
Linum usitatissimum
Lus10026613.g
I
0.717
Lus10030450.g
Linum usitatissimum
Lus10030450.g
I
0.717
Cucsa.284960
Cucumis sativus
Cucsa.284960
I
0.717
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.714
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.708
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.708
Bra031049
Brassica rapa
Bra031049
I
0.708
Bra016544
Brassica rapa
Bra016544
I
0.708
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.708
Gorai.008G194100
Gossypium raimondii
Gorai.008G194100
I
0.708
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.702
Bra025685
Brassica rapa
Bra025685
I
0.702