ORGLA06G0135200 (Oryza glaberrima)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ORGLA06G0135200 T255395_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA06G0135200.1 MADS box 19 66

Links

Other MADS box family TFs
Other Oryza glaberrima TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI06G17150 Oryza meridionalis OMERI06G17150 N 1.000
ONIVA06G15740 Oryza nivara ONIVA06G15740 N 1.000
ORUFI06G17170 Oryza rufipogon ORUFI06G17170 N 1.000
OGLUM06G17310 Oryza glumaepatula OGLUM06G17310 N 1.000
OS06G0504100 Oryza sativa OS06G0504100 N 1.000
OPUNC06G14730 Oryza punctata OPUNC06G14730 N 0.896
OB01G24420 Oryza brachyantha OB01G24420 N 0.792
OMERI06G17270 Oryza meridionalis OMERI06G17270 N 0.771
ORGLA06G0135300 Oryza glaberrima ORGLA06G0135300 N 0.771
LPERR01G04800 Leersia perrieri LPERR01G04800 N 0.771
MLOC_78558 Hordeum vulgare MLOC_78558 N 0.756
OPUNC06G14740 Oryza punctata OPUNC06G14740 N 0.750
OS12G0407000 Oryza sativa OS12G0407000 N 0.750
ORUFI06G17190 Oryza rufipogon ORUFI06G17190 N 0.750
ORGLA12G0089600 Oryza glaberrima ORGLA12G0089600 N 0.750
ORUFI12G10490 Oryza rufipogon ORUFI12G10490 N 0.750
ONIVA12G01580 Oryza nivara ONIVA12G01580 N 0.750
OGLUM06G17330 Oryza glumaepatula OGLUM06G17330 N 0.750
BGIOSGA021177 Oryza indica BGIOSGA021177 N 0.750
BGIOSGA018453 Oryza indica BGIOSGA018453 N 0.750
OGLUM12G10680 Oryza glumaepatula OGLUM12G10680 N 0.750
OBART12G09450 Oryza barthii OBART12G09450 N 0.750
ONIVA06G19160 Oryza nivara ONIVA06G19160 N 0.750
BGIOSGA006672 Oryza indica BGIOSGA006672 N 0.750
OPUNC12G08600 Oryza punctata OPUNC12G08600 N 0.729
PGSC0003DMG400038207 Solanum tuberosum PGSC0003DMG400038207 I 0.729
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.724
PGSC0003DMG400043978 Solanum tuberosum PGSC0003DMG400043978 N 0.723
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
Lus10035456.g Linum usitatissimum Lus10035456.g N 0.708
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.708
OLONG_012664 Oryza longistaminata OLONG_012664 N 0.708
OPUNC06G14680 Oryza punctata OPUNC06G14680 N 0.708
OLONG_018855 Oryza longistaminata OLONG_018855 N 0.706