CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA11G0175900
(
Oryza glaberrima
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ORGLA11G0175900
T255412_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA11G0175900.1
MADS box
10
55
KLENSSGRHVTYSKRRSGILKKAKELSILCDIPLILLMFSPNDKPT
Links
Other
MADS box
family TFs
Other
Oryza glaberrima
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART11G21780
Oryza barthii
OBART11G21780
N
1.000
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
1.000
OS11G0658700
Oryza sativa
OS11G0658700
N
1.000
OGLUM11G21110
Oryza glumaepatula
OGLUM11G21110
N
0.978
OMERI11G18020
Oryza meridionalis
OMERI11G18020
N
0.978
OLONG_008007
Oryza longistaminata
OLONG_008007
N
0.978
LPERR11G18320
Leersia perrieri
LPERR11G18320
N
0.978
BGIOSGA035654
Oryza indica
BGIOSGA035654
N
0.978
OPUNC11G18320
Oryza punctata
OPUNC11G18320
N
0.957
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.913
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.913
Si028357m.g
Setaria italica
Si028357m.g
N
0.891
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.891
BRADI4G11097
Brachypodium distachyon
BRADI4G11097
I
0.891
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.891
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.891
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.870
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.870
F775_13266
Aegilops tauschii
F775_13266
I
0.870
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.870
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.870
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.848
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.812
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.809
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.804
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.804
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.804
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.804
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.783
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.783
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.783
Lus10034464.g
Linum usitatissimum
Lus10034464.g
I
0.761
TCM_014051
Theobroma cacao
TCM_014051
I
0.761
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.750
Gorai.008G194100
Gossypium raimondii
Gorai.008G194100
I
0.750
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.745
gene26028-v1.0-hybrid
Fragaria vesca
gene26028-v1.0-hybrid
I
0.739
Lus10026613.g
Linum usitatissimum
Lus10026613.g
I
0.739
Lus10030450.g
Linum usitatissimum
Lus10030450.g
I
0.739
PK21701.1
Cannabis sativa
PK21701.1
I
0.729
Lus10019089.g
Linum usitatissimum
Lus10019089.g
I
0.729
30138.m004061
Ricinus communis
30138.m004061
I
0.729
PRUPE_ppa015857mg
Prunus persica
PRUPE_ppa015857mg
I
0.717
GSMUA_Achr11G14240_001
Musa acuminata
GSMUA_Achr11G14240_001
N
0.717
Bra025685
Brassica rapa
Bra025685
I
0.717
Cla010361
Citrullus lanatus
Cla010361
I
0.717
SapurV1A.0149s0010
Salix purpurea
SapurV1A.0149s0010
N
0.717
Bo9g072860
Brassica oleracea
Bo9g072860
N
0.717
Lus10037166.g
Linum usitatissimum
Lus10037166.g
N
0.717
Pm024895
Prunus mume
Pm024895
I
0.717
cassava17346.m1
Manihot esculenta
cassava17346.m1
I
0.717
29813.m001508
Ricinus communis
29813.m001508
I
0.717
TCM_011687
Theobroma cacao
TCM_011687
I
0.717
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.708
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.708
cassava46162.m1
Manihot esculenta
cassava46162.m1
I
0.708
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.708
Bra031049
Brassica rapa
Bra031049
I
0.708
Bra016544
Brassica rapa
Bra016544
I
0.708
AGL65
Vitis vinifera
VIT_17s0000g06340
I
0.708