CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400005119
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400005119
T255606_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400013105
MADS box
20
68
PIDNQNSRHVTFSKRRLGLFKKASELCILSGAEIVILVQSLKRQRLFTF
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc01g106700.2
Solanum lycopersicum
Solyc01g106700.2
N
0.979
Solyc04g064860.1
Solanum lycopersicum
Solyc04g064860.1
N
0.917
PGSC0003DMG400024799
Solanum tuberosum
PGSC0003DMG400024799
N
0.917