PGSC0003DMG400039835 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400039835 T255697_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400090264 MADS box 14 61

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.938
PGSC0003DMG400036190 Solanum tuberosum PGSC0003DMG400036190 N 0.872
PGSC0003DMG400047285 Solanum tuberosum PGSC0003DMG400047285 N 0.812
PGSC0003DMG400046706 Solanum tuberosum PGSC0003DMG400046706 N 0.766
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.750
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.729
Solyc01g060300.1 Solanum lycopersicum Solyc01g060300.1 N 0.723
30099.m001672 Ricinus communis 30099.m001672 N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.708
Bo9g142570 Brassica oleracea Bo9g142570 N 0.708
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.708
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.708
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.708
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.708
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.708
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.708