PGSC0003DMG400043978 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400043978 T255720_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400094407 MADS box 14 60

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400038207 Solanum tuberosum PGSC0003DMG400038207 I 0.979
PGSC0003DMG400043595 Solanum tuberosum PGSC0003DMG400043595 N 0.787
ORUFI06G17170 Oryza rufipogon ORUFI06G17170 N 0.723
ORGLA06G0135200 Oryza glaberrima ORGLA06G0135200 N 0.723
PGSC0003DMG400006290 Solanum tuberosum PGSC0003DMG400006290 N 0.723
OS06G0504100 Oryza sativa OS06G0504100 N 0.723
ONIVA06G15740 Oryza nivara ONIVA06G15740 N 0.723
OMERI06G17150 Oryza meridionalis OMERI06G17150 N 0.723
OGLUM06G17310 Oryza glumaepatula OGLUM06G17310 N 0.723
Solyc01g060310.1 Solanum lycopersicum Solyc01g060310.1 N 0.702
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.702
PGSC0003DMG400046733 Solanum tuberosum PGSC0003DMG400046733 N 0.702
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.702
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.702
PGSC0003DMG400036190 Solanum tuberosum PGSC0003DMG400036190 N 0.702