POPTR_0004s00400 (Populus trichocarpa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 POPTR_0004s00400 T255814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s00400.1 MADS box 19 66

Links

Other MADS box family TFs
Other Populus trichocarpa TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0449s0130 Salix purpurea SapurV1A.0449s0130 N 0.896
VIT_10s0003g03970 Vitis vinifera VIT_10s0003g03970 N 0.771
VIT_07s0005g06590 Vitis vinifera VIT_07s0005g06590 N 0.750
cassava27416.m1 Manihot esculenta cassava27416.m1 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
27866.m000233 Ricinus communis 27866.m000233 N 0.708