POPTR_0005s16500 (Populus trichocarpa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 POPTR_0005s16500 T255826_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s16500.1 MADS box 32 57

Links

Other MADS box family TFs
Other Populus trichocarpa TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_5g061740 Medicago truncatula MTR_5g061740 N 0.778
MDP0000243965 Malus domestica MDP0000243965 I 0.769
ORGLA06G0074200 Oryza glaberrima ORGLA06G0074200 I 0.769
ORUFI06G08110 Oryza rufipogon ORUFI06G08110 I 0.769
AGL104 Arabidopsis lyrata Al_scaffold_0001_2320 I 0.769
orange1.1g039560m.g Citrus sinensis orange1.1g039560m.g I 0.769
ONIVA06G09080 Oryza nivara ONIVA06G09080 I 0.769
Bostr.20129s0232 Boechera stricta Bostr.20129s0232 I 0.769
OLONG_004474 Oryza longistaminata OLONG_004474 I 0.769
OMERI06G09450 Oryza meridionalis OMERI06G09450 I 0.769
OS06G0223300 Oryza sativa OS06G0223300 I 0.769
Pm019181 Prunus mume Pm019181 I 0.769
TCM_001182 Theobroma cacao TCM_001182 I 0.769
TCM_034970 Theobroma cacao TCM_034970 I 0.769
Carubv10010907m.g Capsella rubella Carubv10010907m.g I 0.769
Cagra.1707s0007 Capsella grandiflora Cagra.1707s0007 I 0.769
Carubv10021590m.g Capsella rubella Carubv10021590m.g I 0.769
Ciclev10003964m.g Citrus clementina Ciclev10003964m.g I 0.769
POPTR_0002s09290 Populus trichocarpa POPTR_0002s09290 I 0.769
PRUPE_ppa007816mg Prunus persica PRUPE_ppa007816mg I 0.769
gene31290-v1.0-hybrid Fragaria vesca gene31290-v1.0-hybrid I 0.769
OGLUM06G08350 Oryza glumaepatula OGLUM06G08350 I 0.769
OBART06G07860 Oryza barthii OBART06G07860 I 0.769
Bo6g121640 Brassica oleracea Bo6g121640 I 0.769
Bo7g060150 Brassica oleracea Bo7g060150 I 0.769
Bo8g071330 Brassica oleracea Bo8g071330 I 0.769
Bra012308 Brassica rapa Bra012308 I 0.769
Cagra.0096s0037 Capsella grandiflora Cagra.0096s0037 I 0.769
BGIOSGA003731 Oryza indica BGIOSGA003731 I 0.769
AMTR_s00010p00214260 Amborella trichopoda AMTR_s00010p00214260 I 0.769
AGL104 Arabidopsis thaliana AT1G22130 I 0.769
AGL66 Arabidopsis thaliana AT1G77980 I 0.769
Bra015643 Brassica rapa Bra015643 I 0.769
Bra016386 Brassica rapa Bra016386 I 0.769
LPERR06G07270 Leersia perrieri LPERR06G07270 I 0.769
Aquca_014_00554 Aquilegia coerulea Aquca_014_00554 I 0.769
OB08G26170 Oryza brachyantha OB08G26170 I 0.769
Cla014721 Citrullus lanatus Cla014721 I 0.769
GSMUA_Achr9G13010_001 Musa acuminata GSMUA_Achr9G13010_001 I 0.769
GSMUA_Achr3G04450_001 Musa acuminata GSMUA_Achr3G04450_001 I 0.769
AGL66 Arabidopsis lyrata fgenesh2_kg.2__2091__AT1G77980.1 I 0.769
Thhalv10019686m.g Eutrema salsugineum Thhalv10019686m.g I 0.769
SapurV1A.0010s0340 Salix purpurea SapurV1A.0010s0340 I 0.769
29908.m005982 Ricinus communis 29908.m005982 I 0.769
Pavir.Db01574 Panicum virgatum Pavir.Db01574 I 0.731
Thhalv10019795m.g Eutrema salsugineum Thhalv10019795m.g I 0.731
Pavir.J32837 Panicum virgatum Pavir.J32837 I 0.731
Pavir.Fb01739 Panicum virgatum Pavir.Fb01739 I 0.731
Gorai.005G093000 Gossypium raimondii Gorai.005G093000 I 0.731
ORUFI08G21330 Oryza rufipogon ORUFI08G21330 I 0.731
OBART08G19110 Oryza barthii OBART08G19110 I 0.731
OGLUM08G20110 Oryza glumaepatula OGLUM08G20110 I 0.731
LPERR08G16000 Leersia perrieri LPERR08G16000 I 0.731
GRMZM2G334225 Zea mays GRMZM2G334225 I 0.731
BGIOSGA026745 Oryza indica BGIOSGA026745 I 0.731
GRMZM2G152415 Zea mays GRMZM2G152415 I 0.731
ONIVA08G21050 Oryza nivara ONIVA08G21050 I 0.731
ORGLA08G0167200 Oryza glaberrima ORGLA08G0167200 I 0.731
VIT_07s0031g01140 Vitis vinifera VIT_07s0031g01140 I 0.731
Ca_24539 Cicer arietinum Ca_24539 I 0.731
Si013985m.g Setaria italica Si013985m.g I 0.731
Sb10g007810 Sorghum bicolor Sb10g007810 I 0.731
OS08G0494100 Oryza sativa OS08G0494100 I 0.731
PRUPE_ppa023054mg Prunus persica PRUPE_ppa023054mg I 0.731
Bostr.12659s0064 Boechera stricta Bostr.12659s0064 I 0.731