CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa024816mg
(
Prunus persica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PRUPE_ppa024816mg
T255951_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ14347
MADS box
10
57
MVKDSSSRQVTFSKRRTGLFKKANELATLCGAEIGVIVFSPGGKPFSF
Links
Other
MADS box
family TFs
Other
Prunus persica
TFs
108 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm030655
Prunus mume
Pm030655
I
0.979
MDP0000274606
Malus domestica
MDP0000274606
N
0.917
TCM_029518
Theobroma cacao
TCM_029518
I
0.896
29693.m002039
Ricinus communis
29693.m002039
I
0.875
POPTR_0004s13600
Populus trichocarpa
POPTR_0004s13600
N
0.875
evm.TU.supercontig_25.93
Carica papaya
evm.TU.supercontig_25.93
I
0.875
MDP0000120467
Malus domestica
MDP0000120467
N
0.854
Ciclev10017472m.g
Citrus clementina
Ciclev10017472m.g
I
0.854
orange1.1g037442m.g
Citrus sinensis
orange1.1g037442m.g
I
0.854
SapurV1A.0560s0040
Salix purpurea
SapurV1A.0560s0040
N
0.854
SapurV1A.2238s0010
Salix purpurea
SapurV1A.2238s0010
N
0.854
Lus10040832.g
Linum usitatissimum
Lus10040832.g
N
0.833
Eucgr.D00311
Eucalyptus grandis
Eucgr.D00311
N
0.833
Cla019897
Citrullus lanatus
Cla019897
N
0.812
Eucgr.D00313
Eucalyptus grandis
Eucgr.D00313
N
0.812
gene14058-v1.0-hybrid
Fragaria vesca
gene14058-v1.0-hybrid
I
0.812
Gorai.010G165500
Gossypium raimondii
Gorai.010G165500
I
0.812
Bostr.23794s0666
Boechera stricta
Bostr.23794s0666
I
0.792
cassava10519.m1
Manihot esculenta
cassava10519.m1
I
0.792
Cucsa.212320
Cucumis sativus
Cucsa.212320
N
0.792
Eucgr.D00312
Eucalyptus grandis
Eucgr.D00312
N
0.792
Cagra.7352s0007
Capsella grandiflora
Cagra.7352s0007
I
0.792
Carubv10025656m.g
Capsella rubella
Carubv10025656m.g
I
0.792
AGL29
Arabidopsis lyrata
fgenesh2_kg.4__1464__AT2G34440.1
I
0.792
AGL29
Arabidopsis thaliana
AT2G34440
I
0.792
gene30567-v1.0-hybrid
Fragaria vesca
gene30567-v1.0-hybrid
I
0.792
Lus10016563.g
Linum usitatissimum
Lus10016563.g
N
0.792
Bo4g182590
Brassica oleracea
Bo4g182590
I
0.771
Thhalv10017825m.g
Eutrema salsugineum
Thhalv10017825m.g
I
0.771
AGL61
Arabidopsis thaliana
AT2G24840
N
0.771
AGL61
Arabidopsis lyrata
Al_scaffold_0004_541
N
0.771
Bra021910
Brassica rapa
Bra021910
I
0.771
MTR_8g051580
Medicago truncatula
MTR_8g051580
I
0.771
Carubv10024914m.g
Capsella rubella
Carubv10024914m.g
N
0.771
Cagra.1004s0007
Capsella grandiflora
Cagra.1004s0007
N
0.771
Ca_05023
Cicer arietinum
Ca_05023
I
0.771
Lus10011787.g
Linum usitatissimum
Lus10011787.g
N
0.750
Bostr.8705s0016
Boechera stricta
Bostr.8705s0016
N
0.750
Thhalv10000479m.g
Eutrema salsugineum
Thhalv10000479m.g
N
0.750
Thhalv10003338m.g
Eutrema salsugineum
Thhalv10003338m.g
N
0.750
Bostr.7867s1515
Boechera stricta
Bostr.7867s1515
N
0.750
MTR_8g079502
Medicago truncatula
MTR_8g079502
I
0.750
Bo5g113750
Brassica oleracea
Bo5g113750
N
0.750
TCM_006325
Theobroma cacao
TCM_006325
N
0.750
GLYMA08G03820
Glycine max
GLYMA08G03820
I
0.729
Bo8g099550
Brassica oleracea
Bo8g099550
N
0.729
GLYMA08G03830
Glycine max
GLYMA08G03830
I
0.729
GLYMA18G20830
Glycine max
GLYMA18G20830
I
0.729
MTR_1g054265
Medicago truncatula
MTR_1g054265
I
0.729
MTR_1g047550
Medicago truncatula
MTR_1g047550
I
0.729
Bra007829
Brassica rapa
Bra007829
N
0.729
Gorai.002G213500
Gossypium raimondii
Gorai.002G213500
N
0.729
Gorai.005G263100
Gossypium raimondii
Gorai.005G263100
N
0.729
fgenesh1_pm.C_scaffold_7000337
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_7000337
N
0.729
GLYMA05G35811
Glycine max
GLYMA05G35811
I
0.729
Bra038225
Brassica rapa
Bra038225
N
0.729
Bo1g112460
Brassica oleracea
Bo1g112460
N
0.729
Bra032057
Brassica rapa
Bra032057
N
0.729
GLYMA05G35820
Glycine max
GLYMA05G35820
I
0.729
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
0.729
TCM_006323
Theobroma cacao
TCM_006323
N
0.729
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
0.729
scaffold_400572.1
Arabidopsis lyrata
scaffold_400572.1
N
0.729
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.729
MTR_8g046350
Medicago truncatula
MTR_8g046350
N
0.729
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
0.729
MTR_4g131030
Medicago truncatula
MTR_4g131030
I
0.729
Thhalv10027307m.g
Eutrema salsugineum
Thhalv10027307m.g
N
0.708
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.708
AGL62
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002041
N
0.708
chr3.CM0059.60.nd
Lotus japonicus
chr3.CM0059.60.nd
N
0.708
Bra022434
Brassica rapa
Bra022434
N
0.708
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.708
chr4.LjT16L01.50.nd
Lotus japonicus
chr4.LjT16L01.50.nd
I
0.708
MDP0000434703
Malus domestica
MDP0000434703
I
0.708
Thhalv10003426m.g
Eutrema salsugineum
Thhalv10003426m.g
N
0.708
Bo4g157220
Brassica oleracea
Bo4g157220
N
0.708
Gorai.N026300
Gossypium raimondii
Gorai.N026300
N
0.708
AGL91
Arabidopsis thaliana
AT3G66656
D
0.708
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
0.708
Thhalv10022102m.g
Eutrema salsugineum
Thhalv10022102m.g
N
0.708
AT4G36590
Arabidopsis thaliana
AT4G36590
N
0.708
orange1.1g039654m.g
Citrus sinensis
orange1.1g039654m.g
N
0.708
Thhalv10022154m.g
Eutrema salsugineum
Thhalv10022154m.g
I
0.708
evm.TU.supercontig_439.7
Carica papaya
evm.TU.supercontig_439.7
N
0.708
Cagra.0133s0015
Capsella grandiflora
Cagra.0133s0015
I
0.708
MTR_1g063160
Medicago truncatula
MTR_1g063160
I
0.708
Carubv10014761m.g
Capsella rubella
Carubv10014761m.g
I
0.708
Ciclev10030142m.g
Citrus clementina
Ciclev10030142m.g
N
0.708
Al_scaffold_0002_1221
Arabidopsis lyrata
Al_scaffold_0002_1221
N
0.708
Cucsa.298560
Cucumis sativus
Cucsa.298560
N
0.708
Cla006571
Citrullus lanatus
Cla006571
N
0.708
VIT_00s0386g00010
Vitis vinifera
VIT_00s0386g00010
N
0.708
30099.m001672
Ricinus communis
30099.m001672
N
0.708
Solyc01g106730.1
Solanum lycopersicum
Solyc01g106730.1
N
0.708
Gorai.012G163200
Gossypium raimondii
Gorai.012G163200
N
0.708
GLYMA08G38880
Glycine max
GLYMA08G38880
I
0.708
Ca_24185
Cicer arietinum
Ca_24185
I
0.708
evm.TU.supercontig_625.4
Carica papaya
evm.TU.supercontig_625.4
N
0.708
evm.TU.supercontig_654.6
Carica papaya
evm.TU.supercontig_654.6
N
0.708
gene01789-v1.0-hybrid
Fragaria vesca
gene01789-v1.0-hybrid
N
0.708
evm.TU.contig_30005.4
Carica papaya
evm.TU.contig_30005.4
N
0.708
evm.TU.supercontig_347.7
Carica papaya
evm.TU.supercontig_347.7
N
0.708
evm.TU.contig_35713
Carica papaya
evm.TU.contig_35713
N
0.708
evm.TU.contig_35751
Carica papaya
evm.TU.contig_35751
N
0.708
evm.TU.contig_37271
Carica papaya
evm.TU.contig_37271
N
0.708
AGL91
Arabidopsis lyrata
fgenesh2_kg.3__679__AT3G66656.1
I
0.708
Aquca_007_00029
Aquilegia coerulea
Aquca_007_00029
N
0.703