PRUPE_ppa026083mg (Prunus persica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PRUPE_ppa026083mg T255955_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AP3
M08146_2.00 		Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW		 ChIP-seq
Mathelier et al.(2014)
MA0556.1 		0.854 0.854
AP3
M10919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSB_Q2 		0.854 0.854
Q40513_TOBAC
M11001_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DEF_01 		0.812 0.812
Q8VWZ4_MALDO
M11026_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS13_01 		0.812 0.812
MADS2_PETHY
M10998_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_01 		0.771 0.771
MADS16
M10971_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS16_01 		0.750 0.750
Q9AVU7_MALDO
M11027_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PI_01 		0.750 0.750
squamosa
M02697_2.00 		Antirrhinum majus
MYAWAWAWRGHAAN
NTTDCYWTWTWTRK		 SELEX
Mathelier et al.(2014)
MA0082.1 		0.729 0.729
SOC1
M08425_2.00 		Arabidopsis thaliana
CCAAAAAWRGAAAND
HNTTTCYWTTTTTGG		 ChIP-chip
Mathelier et al.(2014)
MA0554.1 		0.729 0.729
SOC1
M10915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL20_01 		0.729 0.729
Q9ATE3_PETHY
M11008_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP28_01 		0.729 0.729
Q38742_ANTMA
M11000_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SQUA_01 		0.729 0.729
SEP2
M10916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL4_01 		0.708 0.708
Q8VWZ2_MALDO
M11024_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS15_02 		0.708 0.708
O82695_MALDO
M11019_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS5_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ28333 MADS box 10 57

Links

Other MADS box family TFs
Other Prunus persica TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm006266 Prunus mume Pm006266 I 0.979
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I 0.875
cassava41235.m1 Manihot esculenta cassava41235.m1 I 0.854
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I 0.854
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I 0.854
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I 0.854
cassava21176.m1 Manihot esculenta cassava21176.m1 I 0.854
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I 0.854
Carubv10018833m.g Capsella rubella Carubv10018833m.g I 0.854
AP3 Arabidopsis thaliana AT3G54340 D 0.854
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I 0.854
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I 0.854
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I 0.854
Bra014822 Brassica rapa Bra014822 I 0.833
Cucsa.342790 Cucumis sativus Cucsa.342790 I 0.833
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I 0.833
cassava33649.m1 Manihot esculenta cassava33649.m1 I 0.833
GLYMA06G02990 Glycine max GLYMA06G02990 I 0.833
Ca_04909 Cicer arietinum Ca_04909 I 0.833
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I 0.833
Bo8g083600 Brassica oleracea Bo8g083600 I 0.833
Bra007067 Brassica rapa Bra007067 I 0.833
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I 0.833
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I 0.833
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I 0.833
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I 0.833
MTR_3g113030 Medicago truncatula MTR_3g113030 I 0.833
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I 0.833
Cla021117 Citrullus lanatus Cla021117 I 0.833
Bo4g120010 Brassica oleracea Bo4g120010 I 0.833
mgf015533m Mimulus guttatus mgf015533m I 0.812
Lus10033187.g Linum usitatissimum Lus10033187.g I 0.812
Pm026712 Prunus mume Pm026712 I 0.812
Ciclev10002410m.g Citrus clementina Ciclev10002410m.g I 0.812
TCM_000266 Theobroma cacao TCM_000266 I 0.812
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I 0.812
MDP0000315938 Malus domestica MDP0000315938 I 0.812
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I 0.812
orange1.1g040046m.g Citrus sinensis orange1.1g040046m.g I 0.812
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D 0.812
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I 0.812
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I 0.812
AP3 Vitis vinifera VIT_18s0001g13460 I 0.812
AP3 Populus trichocarpa POPTR_0002s02990 I 0.812
GLYMA04G02980 Glycine max GLYMA04G02980 I 0.812
MDP0000133037 Malus domestica MDP0000133037 I 0.812
MDP0000184294 Malus domestica MDP0000184294 I 0.812
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D 0.812
MDP0000224779 Malus domestica MDP0000224779 I 0.812
POPTR_0007s13660 Populus trichocarpa POPTR_0007s13660 I 0.792
MTR_5g021270 Medicago truncatula MTR_5g021270 I 0.792
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I 0.792
TCM_034148 Theobroma cacao TCM_034148 I 0.792
GLYMA11G07820 Glycine max GLYMA11G07820 I 0.792
GLYMA01G37470 Glycine max GLYMA01G37470 I 0.792
Lus10031960.g Linum usitatissimum Lus10031960.g I 0.792
Ca_01994 Cicer arietinum Ca_01994 I 0.792
Lus10010630.g Linum usitatissimum Lus10010630.g I 0.792
SapurV1A.0569s0080 Salix purpurea SapurV1A.0569s0080 I 0.792
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I 0.792
Gorai.009G271100 Gossypium raimondii Gorai.009G271100 I 0.792
Eucgr.I02376 Eucalyptus grandis Eucgr.I02376 I 0.771
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I 0.771
SapurV1A.0025s0830 Salix purpurea SapurV1A.0025s0830 I 0.771
MADS2_PETHY Petunia x hybrida MADS2_PETHY D 0.771
SapurV1A.0396s0210 Salix purpurea SapurV1A.0396s0210 I 0.771
29782.m000119 Ricinus communis 29782.m000119 I 0.771
PGSC0003DMG400003709 Solanum tuberosum PGSC0003DMG400003709 I 0.771
Solyc04g081000.2 Solanum lycopersicum Solyc04g081000.2 I 0.771
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I 0.771
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I 0.771
TRIUR3_29719 Triticum urartu TRIUR3_29719 I 0.750
Traes_7DL_DDCC09B24 Triticum aestivum Traes_7DL_DDCC09B24 I 0.750
TCM_035212 Theobroma cacao TCM_035212 I 0.750
Sb10g029810 Sorghum bicolor Sb10g029810 I 0.750
cassava33721.m1 Manihot esculenta cassava33721.m1 I 0.750
Si007221m.g Setaria italica Si007221m.g I 0.750
29648.m001978 Ricinus communis 29648.m001978 I 0.750
Traes_7AL_1C76E543C Triticum aestivum Traes_7AL_1C76E543C I 0.750
evm.TU.supercontig_26.316 Carica papaya evm.TU.supercontig_26.316 I 0.750
LPERR06G22780 Leersia perrieri LPERR06G22780 I 0.750
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I 0.750
GRMZM2G139073 Zea mays GRMZM2G139073 I 0.750
MLOC_31575 Hordeum vulgare MLOC_31575 I 0.750
OBART06G27230 Oryza barthii OBART06G27230 I 0.750
OLONG_004226 Oryza longistaminata OLONG_004226 I 0.750
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I 0.750
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I 0.750
orange1.1g024093m.g Citrus sinensis orange1.1g024093m.g I 0.750
BGIOSGA020546 Oryza indica BGIOSGA020546 I 0.750
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I 0.750
Q9AVU7_MALDO Malus domestica Q9AVU7_MALDO D 0.750
Pavir.J11672 Panicum virgatum Pavir.J11672 I 0.750
orange1.1g040096m.g Citrus sinensis orange1.1g040096m.g I 0.750
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I 0.750
OMERI06G27290 Oryza meridionalis OMERI06G27290 I 0.750
OB06G35020 Oryza brachyantha OB06G35020 I 0.750
Ciclev10009338m.g Citrus clementina Ciclev10009338m.g I 0.750
Ciclev10002471m.g Citrus clementina Ciclev10002471m.g I 0.750
MADS16 Oryza sativa OS06G0712700 D 0.750
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I 0.750
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I 0.750
ONIVA06G29820 Oryza nivara ONIVA06G29820 I 0.750
Cagra.0050s0134 Capsella grandiflora Cagra.0050s0134 I 0.729
orange1.1g042044m.g Citrus sinensis orange1.1g042044m.g I 0.729
cassava32003.m1 Manihot esculenta cassava32003.m1 I 0.729
Bostr.25993s0208 Boechera stricta Bostr.25993s0208 I 0.729
Q9ATE3_PETHY Petunia x hybrida Q9ATE3_PETHY D 0.729
Ciclev10002422m.g Citrus clementina Ciclev10002422m.g I 0.729
Q38742_ANTMA Antirrhinum majus Q38742_ANTMA D 0.729
Thhalv10001632m.g Eutrema salsugineum Thhalv10001632m.g I 0.729
Eucgr.E01006 Eucalyptus grandis Eucgr.E01006 I 0.729
Lus10042749.g Linum usitatissimum Lus10042749.g I 0.729
mgf000046m Mimulus guttatus mgf000046m I 0.729
estExt_gwp_gw1.C_900087 Physcomitrella patens estExt_gwp_gw1.C_900087 I 0.729
Carubv10024046m.g Capsella rubella Carubv10024046m.g I 0.729
Cucsa.018420 Cucumis sativus Cucsa.018420 I 0.729
gene11267-v1.0-hybrid Fragaria vesca gene11267-v1.0-hybrid I 0.729
Gorai.002G223100 Gossypium raimondii Gorai.002G223100 I 0.729
evm.TU.supercontig_18.166 Carica papaya evm.TU.supercontig_18.166 I 0.729
estExt_gwp_gw1.C_1630046 Physcomitrella patens estExt_gwp_gw1.C_1630046 I 0.729
Lus10029719.g Linum usitatissimum Lus10029719.g I 0.729
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I 0.729
squamosa Antirrhinum majus CAA45228.1 D 0.729
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I 0.729
TT16 Vitis vinifera VIT_01s0011g01560 I 0.729
VIT_15s0048g01240 Vitis vinifera VIT_15s0048g01240 I 0.729
Bo3g038880 Brassica oleracea Bo3g038880 I 0.729
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I 0.729
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.729
Solyc06g059970.2 Solanum lycopersicum Solyc06g059970.2 I 0.729
GLYMA03G02191 Glycine max GLYMA03G02191 I 0.729
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.729
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I 0.729
PI Vitis vinifera VIT_18s0001g01760 I 0.729
AGL20 Arabidopsis lyrata scaffold_403512.1 I 0.729
Cla023547 Citrullus lanatus Cla023547 I 0.729
SOC1 Arabidopsis thaliana AT2G45660 D 0.729
AMTR_s00001p00266470 Amborella trichopoda AMTR_s00001p00266470 I 0.729
Bra039324 Brassica rapa Bra039324 I 0.729
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I 0.729
Bra000393 Brassica rapa Bra000393 I 0.729
MDP0000179718 Malus domestica MDP0000179718 I 0.727
O82695_MALDO Malus domestica O82695_MALDO D 0.708
MDP0000324166 Malus domestica MDP0000324166 I 0.708
BRADI1G21980 Brachypodium distachyon BRADI1G21980 I 0.708
MDP0000250080 Malus domestica MDP0000250080 I 0.708
MDP0000242009 Malus domestica MDP0000242009 I 0.708
AGL14 Arabidopsis lyrata fgenesh2_kg.6__3138__AT4G11880.1 I 0.708
GLYMA04G43640 Glycine max GLYMA04G43640 I 0.708
Lus10006715.g Linum usitatissimum Lus10006715.g I 0.708
Lus10006716.g Linum usitatissimum Lus10006716.g I 0.708
Gorai.011G035500 Gossypium raimondii Gorai.011G035500 I 0.708
GLYMA14G24590 Glycine max GLYMA14G24590 I 0.708
Gorai.007G009800 Gossypium raimondii Gorai.007G009800 I 0.708
GLYMA18G45780 Glycine max GLYMA18G45780 I 0.708
GLYMA13G09660 Glycine max GLYMA13G09660 I 0.708
Lus10014144.g Linum usitatissimum Lus10014144.g I 0.708
MDP0000013331 Malus domestica MDP0000013331 I 0.708
GLYMA04G42420 Glycine max GLYMA04G42420 I 0.708
Bra039170 Brassica rapa Bra039170 I 0.708
GLYMA06G12380 Glycine max GLYMA06G12380 I 0.708
GLYMA09G40230 Glycine max GLYMA09G40230 I 0.708
GLYMA07G08831 Glycine max GLYMA07G08831 I 0.708
MDP0000148857 Malus domestica MDP0000148857 I 0.708
Bo5g152700 Brassica oleracea Bo5g152700 I 0.708
SapurV1A.2206s0010 Salix purpurea SapurV1A.2206s0010 I 0.708
AGL14 Arabidopsis thaliana AT4G11880 I 0.708
AGL71 Arabidopsis thaliana AT5G51870 I 0.708
SapurV1A.0578s0130 Salix purpurea SapurV1A.0578s0130 I 0.708
Bo1g031900 Brassica oleracea Bo1g031900 I 0.708
SEP2 Arabidopsis thaliana AT3G02310 D 0.708
Thhalv10021390m.g Eutrema salsugineum Thhalv10021390m.g I 0.708
chr4.CM0046.610.nc Lotus japonicus chr4.CM0046.610.nc I 0.708
LjSGA_047687.2 Lotus japonicus LjSGA_047687.2 I 0.708
PK09312.1 Cannabis sativa PK09312.1 I 0.708
Thhalv10028949m.g Eutrema salsugineum Thhalv10028949m.g I 0.708
Thhalv10027162m.g Eutrema salsugineum Thhalv10027162m.g I 0.708
Bo1g157450 Brassica oleracea Bo1g157450 I 0.708
SapurV1A.0383s0080 Salix purpurea SapurV1A.0383s0080 I 0.708
Bra004928 Brassica rapa Bra004928 I 0.708
Gorai.005G147200 Gossypium raimondii Gorai.005G147200 I 0.708
Bra013662 Brassica rapa Bra013662 I 0.708
Bra021470 Brassica rapa Bra021470 I 0.708
orange1.1g036452m.g Citrus sinensis orange1.1g036452m.g I 0.708
Pavir.J22336 Panicum virgatum Pavir.J22336 I 0.708
Q8VWZ2_MALDO Malus domestica Q8VWZ2_MALDO D 0.708
SapurV1A.0282s0240 Salix purpurea SapurV1A.0282s0240 I 0.708
SapurV1A.0323s0180 Salix purpurea SapurV1A.0323s0180 I 0.708
SapurV1A.0045s0580 Salix purpurea SapurV1A.0045s0580 I 0.708
Bo4g024850 Brassica oleracea Bo4g024850 I 0.708
Bo4g195720 Brassica oleracea Bo4g195720 I 0.708
orange1.1g028363m.g Citrus sinensis orange1.1g028363m.g I 0.708
gene11268-v1.0-hybrid Fragaria vesca gene11268-v1.0-hybrid I 0.708
Si038299m.g Setaria italica Si038299m.g I 0.708
fgenesh1_pg.scaffold_163000049 Physcomitrella patens fgenesh1_pg.scaffold_163000049 I 0.708
estExt_fgenesh1_pm.C_80015 Physcomitrella patens estExt_fgenesh1_pm.C_80015 I 0.708
estExt_fgenesh1_pg.C_1180093 Physcomitrella patens estExt_fgenesh1_pg.C_1180093 I 0.708
Solyc07g055920.2 Solanum lycopersicum Solyc07g055920.2 I 0.708
e_gw1.55.5.1 Physcomitrella patens e_gw1.55.5.1 I 0.708
Si030896m.g Setaria italica Si030896m.g I 0.708
mgf007062m Mimulus guttatus mgf007062m I 0.708
SEP2 Arabidopsis lyrata scaffold_300166.1 I 0.708
Sb02g038780 Sorghum bicolor Sb02g038780 I 0.708
Bostr.25463s0138 Boechera stricta Bostr.25463s0138 I 0.708
Bostr.1460s0147 Boechera stricta Bostr.1460s0147 I 0.708
mgf021705m Mimulus guttatus mgf021705m I 0.708
Cucsa.302640 Cucumis sativus Cucsa.302640 I 0.708
TCM_005456 Theobroma cacao TCM_005456 I 0.708
Pm004718 Prunus mume Pm004718 I 0.708
Cla011687 Citrullus lanatus Cla011687 I 0.708
Pm010346 Prunus mume Pm010346 I 0.708
Pm018087 Prunus mume Pm018087 I 0.708
Pm024524 Prunus mume Pm024524 I 0.708
Ca_16423 Cicer arietinum Ca_16423 I 0.708
cassava28648.m1 Manihot esculenta cassava28648.m1 I 0.708
TCM_016147 Theobroma cacao TCM_016147 I 0.708
cassava723.valid.m1 Manihot esculenta cassava723.valid.m1 I 0.708
Ca_03887 Cicer arietinum Ca_03887 I 0.708
Ca_13111 Cicer arietinum Ca_13111 I 0.708
cassava30125.valid.m1 Manihot esculenta cassava30125.valid.m1 I 0.708
Cagra.1194s0071 Capsella grandiflora Cagra.1194s0071 I 0.708
Cagra.7242s0001 Capsella grandiflora Cagra.7242s0001 I 0.708
PGSC0003DMG400017295 Solanum tuberosum PGSC0003DMG400017295 I 0.708
OPUNC06G24880 Oryza punctata OPUNC06G24880 I 0.708
POPTR_0001s08510 Populus trichocarpa POPTR_0001s08510 I 0.708
Eucgr.I00556 Eucalyptus grandis Eucgr.I00556 I 0.708
POPTR_0005s20480 Populus trichocarpa POPTR_0005s20480 I 0.708
MTR_7g075870 Medicago truncatula MTR_7g075870 I 0.708
MTR_3g088615 Medicago truncatula MTR_3g088615 I 0.708
GSMUA_Achr3G02280_001 Musa acuminata GSMUA_Achr3G02280_001 I 0.708
Gorai.004G155700 Gossypium raimondii Gorai.004G155700 I 0.708
GSMUA_Achr5G20280_001 Musa acuminata GSMUA_Achr5G20280_001 I 0.708
gene24852-v1.0-hybrid Fragaria vesca gene24852-v1.0-hybrid I 0.708
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.708
Eucgr.E01007 Eucalyptus grandis Eucgr.E01007 I 0.708
POPTR_0008s09780 Populus trichocarpa POPTR_0008s09780 I 0.708
PRUPE_ppa022942mg Prunus persica PRUPE_ppa022942mg I 0.708
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.708
Sb01g030570 Sorghum bicolor Sb01g030570 I 0.708
Carubv10014470m.g Capsella rubella Carubv10014470m.g I 0.708
Carubv10001906m.g Capsella rubella Carubv10001906m.g I 0.708
PRUPE_ppa019932mg Prunus persica PRUPE_ppa019932mg I 0.708
PRUPE_ppa012927mg Prunus persica PRUPE_ppa012927mg I 0.708
POPTR_0013s09960 Populus trichocarpa POPTR_0013s09960 I 0.708
Eucgr.D02425 Eucalyptus grandis Eucgr.D02425 I 0.708
Ciclev10023160m.g Citrus clementina Ciclev10023160m.g I 0.708
POPTR_0014s07020 Populus trichocarpa POPTR_0014s07020 I 0.708
PRUPE_ppa010595mg Prunus persica PRUPE_ppa010595mg I 0.708
GRMZM2G147716 Zea mays GRMZM2G147716 I 0.708