CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_104372.1
(
Arabidopsis lyrata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
scaffold_104372.1
T256110_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_104372.1
MADS box
10
57
RIENSIERKATFLRLRDDIFKKADALEKLCHVEVVVLVISPTNVPYTY
Links
Other
MADS box
family TFs
Other
Arabidopsis lyrata
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_104367.1
Arabidopsis lyrata
scaffold_104367.1
N
0.917
Bostr.15654s0054
Boechera stricta
Bostr.15654s0054
N
0.771
fgenesh1_pm.C_scaffold_1003002
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003002
N
0.750
AGL102
Arabidopsis thaliana
AT1G47760
N
0.750