SELMODRAFT_449721 (Selaginella moellendorffii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 SELMODRAFT_449721 T256147_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ16272 MADS box 10 57

Links

Other MADS box family TFs
Other Selaginella moellendorffii TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SELMODRAFT_449720 Selaginella moellendorffii SELMODRAFT_449720 N 1.000
fgenesh1_pg.scaffold_163000049 Physcomitrella patens fgenesh1_pg.scaffold_163000049 I 0.917
estExt_fgenesh1_pm.C_80015 Physcomitrella patens estExt_fgenesh1_pm.C_80015 I 0.917
e_gw1.55.5.1 Physcomitrella patens e_gw1.55.5.1 I 0.896
estExt_gwp_gw1.C_900087 Physcomitrella patens estExt_gwp_gw1.C_900087 I 0.896
estExt_fgenesh1_pg.C_1180093 Physcomitrella patens estExt_fgenesh1_pg.C_1180093 I 0.896
e_gw1.273.6.1 Physcomitrella patens e_gw1.273.6.1 I 0.875
estExt_Genewise1.C_80073 Physcomitrella patens estExt_Genewise1.C_80073 I 0.875
estExt_gwp_gw1.C_1630046 Physcomitrella patens estExt_gwp_gw1.C_1630046 I 0.875
estExt_fgenesh1_kg.C_550007 Physcomitrella patens estExt_fgenesh1_kg.C_550007 I 0.875
estExt_gwp_gw1.C_340302 Physcomitrella patens estExt_gwp_gw1.C_340302 I 0.875
AMTR_s00010p00214260 Amborella trichopoda AMTR_s00010p00214260 I 0.833
cassava32041.m1 Manihot esculenta cassava32041.m1 I 0.812
Cla014721 Citrullus lanatus Cla014721 I 0.812
POPTR_0002s09290 Populus trichocarpa POPTR_0002s09290 I 0.792
GSMUA_Achr3G04450_001 Musa acuminata GSMUA_Achr3G04450_001 I 0.792
orange1.1g039560m.g Citrus sinensis orange1.1g039560m.g I 0.792
MDP0000243965 Malus domestica MDP0000243965 I 0.792
Pm019181 Prunus mume Pm019181 I 0.792
Ciclev10003964m.g Citrus clementina Ciclev10003964m.g I 0.792
Aquca_014_00554 Aquilegia coerulea Aquca_014_00554 I 0.792
GSMUA_Achr9G13010_001 Musa acuminata GSMUA_Achr9G13010_001 I 0.792
PRUPE_ppa007816mg Prunus persica PRUPE_ppa007816mg I 0.792
TCM_034970 Theobroma cacao TCM_034970 I 0.792
29908.m005982 Ricinus communis 29908.m005982 I 0.792
SapurV1A.0010s0340 Salix purpurea SapurV1A.0010s0340 I 0.792
gene31290-v1.0-hybrid Fragaria vesca gene31290-v1.0-hybrid I 0.792
TCM_001182 Theobroma cacao TCM_001182 I 0.792
OLONG_004474 Oryza longistaminata OLONG_004474 I 0.771
Si008439m.g Setaria italica Si008439m.g I 0.771
Lus10022506.g Linum usitatissimum Lus10022506.g I 0.771
Si013985m.g Setaria italica Si013985m.g I 0.771
Gorai.005G093000 Gossypium raimondii Gorai.005G093000 I 0.771
Pm005355 Prunus mume Pm005355 I 0.771
Ca_01572 Cicer arietinum Ca_01572 I 0.771
AGL104 Arabidopsis lyrata Al_scaffold_0001_2320 I 0.771
POPTR_0007s05980 Populus trichocarpa POPTR_0007s05980 I 0.771
PRUPE_ppa023054mg Prunus persica PRUPE_ppa023054mg I 0.771
Lus10016810.g Linum usitatissimum Lus10016810.g I 0.771
Sb10g007810 Sorghum bicolor Sb10g007810 I 0.771
VIT_07s0031g01140 Vitis vinifera VIT_07s0031g01140 I 0.771
Ca_24539 Cicer arietinum Ca_24539 I 0.771
Carubv10010907m.g Capsella rubella Carubv10010907m.g I 0.771
Pavir.Fb01739 Panicum virgatum Pavir.Fb01739 I 0.771
Pavir.J32837 Panicum virgatum Pavir.J32837 I 0.771
Pavir.Db01574 Panicum virgatum Pavir.Db01574 I 0.771
GLYMA04G04641 Glycine max GLYMA04G04641 I 0.771
GRMZM2G152415 Zea mays GRMZM2G152415 I 0.771
Bra016386 Brassica rapa Bra016386 I 0.771
Bra012308 Brassica rapa Bra012308 I 0.771
AGL104 Arabidopsis thaliana AT1G22130 I 0.771
Bo7g060150 Brassica oleracea Bo7g060150 I 0.771
Bo8g071330 Brassica oleracea Bo8g071330 I 0.771
SapurV1A.0293s0130 Salix purpurea SapurV1A.0293s0130 I 0.771
GRMZM2G334225 Zea mays GRMZM2G334225 I 0.771
GLYMA14G34160 Glycine max GLYMA14G34160 I 0.771
cassava22012.m1 Manihot esculenta cassava22012.m1 I 0.771
LPERR06G07270 Leersia perrieri LPERR06G07270 I 0.771
OB08G26170 Oryza brachyantha OB08G26170 I 0.771
MTR_4g084740 Medicago truncatula MTR_4g084740 I 0.771
Cagra.1707s0007 Capsella grandiflora Cagra.1707s0007 I 0.771
SELMODRAFT_451128 Selaginella moellendorffii SELMODRAFT_451128 I 0.766
SELMODRAFT_449788 Selaginella moellendorffii SELMODRAFT_449788 I 0.766
Traes_7BL_7F4124E70 Triticum aestivum Traes_7BL_7F4124E70 I 0.760
Bostr.12659s0064 Boechera stricta Bostr.12659s0064 I 0.750
Carubv10021590m.g Capsella rubella Carubv10021590m.g I 0.750
Bostr.20129s0232 Boechera stricta Bostr.20129s0232 I 0.750
Ciclev10001730m.g Citrus clementina Ciclev10001730m.g I 0.750
30170.m013776 Ricinus communis 30170.m013776 I 0.750
VIT_18s0001g09540 Vitis vinifera VIT_18s0001g09540 I 0.750
Cagra.0096s0037 Capsella grandiflora Cagra.0096s0037 I 0.750
evm.TU.supercontig_21.133 Carica papaya evm.TU.supercontig_21.133 I 0.750
cassava25616.m1 Manihot esculenta cassava25616.m1 I 0.750
OS06G0223300 Oryza sativa OS06G0223300 I 0.750
LPERR08G16000 Leersia perrieri LPERR08G16000 I 0.750
GLYMA13G02170 Glycine max GLYMA13G02170 I 0.750
MTR_3g102570 Medicago truncatula MTR_3g102570 I 0.750
OB06G17440 Oryza brachyantha OB06G17440 I 0.750
OBART08G19110 Oryza barthii OBART08G19110 I 0.750
OBART06G07860 Oryza barthii OBART06G07860 I 0.750
AGL66 Arabidopsis lyrata fgenesh2_kg.2__2091__AT1G77980.1 I 0.750
orange1.1g046530m.g Citrus sinensis orange1.1g046530m.g I 0.750
BGIOSGA003731 Oryza indica BGIOSGA003731 I 0.750
AGL66 Arabidopsis thaliana AT1G77980 I 0.750
BGIOSGA026745 Oryza indica BGIOSGA026745 I 0.750
Bo6g121640 Brassica oleracea Bo6g121640 I 0.750
Bra015643 Brassica rapa Bra015643 I 0.750
Thhalv10019686m.g Eutrema salsugineum Thhalv10019686m.g I 0.750
OGLUM08G20110 Oryza glumaepatula OGLUM08G20110 I 0.750
OGLUM06G08350 Oryza glumaepatula OGLUM06G08350 I 0.750
OS08G0494100 Oryza sativa OS08G0494100 I 0.750
ORUFI08G21330 Oryza rufipogon ORUFI08G21330 I 0.750
Gorai.009G216900 Gossypium raimondii Gorai.009G216900 I 0.750
Gorai.007G242000 Gossypium raimondii Gorai.007G242000 I 0.750
Solyc04g078300.2 Solanum lycopersicum Solyc04g078300.2 I 0.750
Gorai.005G100600 Gossypium raimondii Gorai.005G100600 I 0.750
ORGLA08G0167200 Oryza glaberrima ORGLA08G0167200 I 0.750
ORUFI06G08110 Oryza rufipogon ORUFI06G08110 I 0.750
Lus10018714.g Linum usitatissimum Lus10018714.g I 0.750
ONIVA06G09080 Oryza nivara ONIVA06G09080 I 0.750
ORGLA06G0074200 Oryza glaberrima ORGLA06G0074200 I 0.750
OPUNC06G07570 Oryza punctata OPUNC06G07570 I 0.750
OPUNC08G17110 Oryza punctata OPUNC08G17110 I 0.750
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.739
PK28167.1 Cannabis sativa PK28167.1 I 0.729
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I 0.729
MDP0000209705 Malus domestica MDP0000209705 I 0.729
PK21701.1 Cannabis sativa PK21701.1 I 0.729
Eucgr.I00556 Eucalyptus grandis Eucgr.I00556 I 0.729
MDP0000233948 Malus domestica MDP0000233948 I 0.729
Traes_4DS_A28BC582A Triticum aestivum Traes_4DS_A28BC582A I 0.729
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I 0.729
BRADI3G39177 Brachypodium distachyon BRADI3G39177 I 0.729
OMERI06G09450 Oryza meridionalis OMERI06G09450 I 0.729
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I 0.729
PRUPE_ppa020874mg Prunus persica PRUPE_ppa020874mg I 0.729
ONIVA08G21050 Oryza nivara ONIVA08G21050 I 0.729
F775_03584 Aegilops tauschii F775_03584 I 0.729
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I 0.729
Pm002166 Prunus mume Pm002166 I 0.729
TRIUR3_20588 Triticum urartu TRIUR3_20588 I 0.729
mgf017317m Mimulus guttatus mgf017317m I 0.729
mgf015964m Mimulus guttatus mgf015964m I 0.729
Bo2g149440 Brassica oleracea Bo2g149440 I 0.708
AGL79 Arabidopsis lyrata Al_scaffold_0005_914 I 0.708
GLYMA01G02880 Glycine max GLYMA01G02880 I 0.708
MTR_5g032520 Medicago truncatula MTR_5g032520 I 0.708
MTR_5g032150 Medicago truncatula MTR_5g032150 I 0.708
PK20651.1 Cannabis sativa PK20651.1 I 0.708
PK19764.1 Cannabis sativa PK19764.1 I 0.708
Thhalv10019795m.g Eutrema salsugineum Thhalv10019795m.g I 0.708
Bo9g014270 Brassica oleracea Bo9g014270 I 0.708
Bo9g009030 Brassica oleracea Bo9g009030 I 0.708
Bra020742 Brassica rapa Bra020742 I 0.708
Bra026507 Brassica rapa Bra026507 I 0.708
PK10594.1 Cannabis sativa PK10594.1 I 0.708
Bra036201 Brassica rapa Bra036201 I 0.708
Thhalv10004826m.g Eutrema salsugineum Thhalv10004826m.g I 0.708
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I 0.708
Cucsa.104010 Cucumis sativus Cucsa.104010 I 0.708
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I 0.708
29838.m001690 Ricinus communis 29838.m001690 I 0.708
Cagra.0096s0039 Capsella grandiflora Cagra.0096s0039 I 0.708
Cucsa.331840 Cucumis sativus Cucsa.331840 I 0.708
mgf019100m Mimulus guttatus mgf019100m N 0.708
Bostr.0556s0620 Boechera stricta Bostr.0556s0620 I 0.708
Carubv10021761m.g Capsella rubella Carubv10021761m.g I 0.708
Cla014322 Citrullus lanatus Cla014322 I 0.708
mgf021705m Mimulus guttatus mgf021705m I 0.708
OMERI08G15140 Oryza meridionalis OMERI08G15140 I 0.708
Lus10024823.g Linum usitatissimum Lus10024823.g I 0.708
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I 0.708
Solyc05g051830.2 Solanum lycopersicum Solyc05g051830.2 N 0.708
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I 0.708
TCM_000992 Theobroma cacao TCM_000992 I 0.708
MDP0000152821 Malus domestica MDP0000152821 I 0.708