CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si028357m.g
(
Setaria italica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Si028357m.g
T256249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si028357m
MADS box
10
55
KLENSSGRQVTYSKRRSGILKKAKELSILCDIHLLLLMFSPSEKPT
Links
Other
MADS box
family TFs
Other
Setaria italica
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.935
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.935
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.913
ORGLA11G0175900
Oryza glaberrima
ORGLA11G0175900
N
0.891
OLONG_008007
Oryza longistaminata
OLONG_008007
N
0.891
OBART11G21780
Oryza barthii
OBART11G21780
N
0.891
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
0.891
OGLUM11G21110
Oryza glumaepatula
OGLUM11G21110
N
0.891
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.891
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.891
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.891
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.891
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.891
LPERR11G18320
Leersia perrieri
LPERR11G18320
N
0.891
OS11G0658700
Oryza sativa
OS11G0658700
N
0.891
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.891
F775_13266
Aegilops tauschii
F775_13266
I
0.891
BGIOSGA035654
Oryza indica
BGIOSGA035654
N
0.870
OMERI11G18020
Oryza meridionalis
OMERI11G18020
N
0.870
BRADI4G11097
Brachypodium distachyon
BRADI4G11097
I
0.870
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.848
OPUNC11G18320
Oryza punctata
OPUNC11G18320
N
0.848
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.809
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.804
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.804
Lus10034464.g
Linum usitatissimum
Lus10034464.g
I
0.804
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.804
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.804
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.804
30138.m004061
Ricinus communis
30138.m004061
I
0.771
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.771
Gorai.008G194100
Gossypium raimondii
Gorai.008G194100
I
0.771
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.771
Lus10019089.g
Linum usitatissimum
Lus10019089.g
I
0.771
PK21701.1
Cannabis sativa
PK21701.1
I
0.771
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.761
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.761
TCM_014051
Theobroma cacao
TCM_014051
I
0.761
Bra031049
Brassica rapa
Bra031049
I
0.761
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.761
gene26028-v1.0-hybrid
Fragaria vesca
gene26028-v1.0-hybrid
I
0.761
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.761
cassava46162.m1
Manihot esculenta
cassava46162.m1
I
0.761
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.761
Bra016544
Brassica rapa
Bra016544
I
0.761
Bra025685
Brassica rapa
Bra025685
I
0.761
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.745
PRUPE_ppa015857mg
Prunus persica
PRUPE_ppa015857mg
I
0.739
MDP0000193129
Malus domestica
MDP0000193129
I
0.739
cassava19791.m1
Manihot esculenta
cassava19791.m1
I
0.739
Pm024895
Prunus mume
Pm024895
I
0.739
SapurV1A.0149s0010
Salix purpurea
SapurV1A.0149s0010
N
0.717
SapurV1A.0458s0040
Salix purpurea
SapurV1A.0458s0040
I
0.717
cassava17346.m1
Manihot esculenta
cassava17346.m1
I
0.717
Cla010361
Citrullus lanatus
Cla010361
I
0.717
Bo9g072860
Brassica oleracea
Bo9g072860
N
0.717
TCM_011687
Theobroma cacao
TCM_011687
I
0.717
GSMUA_Achr11G14240_001
Musa acuminata
GSMUA_Achr11G14240_001
N
0.717
Lus10030450.g
Linum usitatissimum
Lus10030450.g
I
0.717
Cla018884
Citrullus lanatus
Cla018884
I
0.717
Lus10026613.g
Linum usitatissimum
Lus10026613.g
I
0.717
estExt_gwp_gw1.C_340302
Physcomitrella patens
estExt_gwp_gw1.C_340302
I
0.717
Cucsa.112840
Cucumis sativus
Cucsa.112840
I
0.717
29813.m001508
Ricinus communis
29813.m001508
I
0.717
AGL65
Vitis vinifera
VIT_17s0000g06340
I
0.708