Si028357m.g (Setaria italica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Si028357m.g T256249_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si028357m MADS box 10 55

Links

Other MADS box family TFs
Other Setaria italica TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.809
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.771
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.804
estExt_gwp_gw1.C_340302 Physcomitrella patens estExt_gwp_gw1.C_340302 I 0.717
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.717
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.761
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.739
30138.m004061 Ricinus communis 30138.m004061 I 0.771
29813.m001508 Ricinus communis 29813.m001508 I 0.717
Pm024895 Prunus mume Pm024895 I 0.739
Cla018884 Citrullus lanatus Cla018884 I 0.717
Cla010361 Citrullus lanatus Cla010361 I 0.717
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.708
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.891
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.761
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.771
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.771
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.891
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.761
PK21701.1 Cannabis sativa PK21701.1 I 0.771
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.804
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.761
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.717
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.935
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.935
MDP0000193129 Malus domestica MDP0000193129 I 0.739
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.804
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.717
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.717
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.771
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.891
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.891
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.891
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.804
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.804
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.745
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.848
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.761
F775_13266 Aegilops tauschii F775_13266 I 0.891
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.870
Bra031049 Brassica rapa Bra031049 I 0.761
Bra025685 Brassica rapa Bra025685 I 0.761
Bra016544 Brassica rapa Bra016544 I 0.761
Bo8g104060 Brassica oleracea Bo8g104060 I 0.761
Bo8g068060 Brassica oleracea Bo8g068060 I 0.761
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.913
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.804
TCM_014051 Theobroma cacao TCM_014051 I 0.761
TCM_011687 Theobroma cacao TCM_011687 I 0.717
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.891
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.739
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.717
OBART11G21780 Oryza barthii OBART11G21780 N 0.891
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.870
Bo9g072860 Brassica oleracea Bo9g072860 N 0.717
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.717
OS11G0658700 Oryza sativa OS11G0658700 N 0.891
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.891
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.891
OPUNC11G18320 Oryza punctata OPUNC11G18320 N 0.848
GSMUA_Achr11G14240_001 Musa acuminata GSMUA_Achr11G14240_001 N 0.717
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.870
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.891
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.891
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.891