Solyc05g051830.2 (Solanum lycopersicum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Solyc05g051830.2 T256347_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g051830.2.1 MADS box 10 57

Links

Other MADS box family TFs
Other Solanum lycopersicum TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_3g102570 Medicago truncatula MTR_3g102570 I 0.812
evm.TU.supercontig_21.133 Carica papaya evm.TU.supercontig_21.133 I 0.792
estExt_gwp_gw1.C_1630046 Physcomitrella patens estExt_gwp_gw1.C_1630046 I 0.792
Ca_01572 Cicer arietinum Ca_01572 I 0.792
GLYMA04G04641 Glycine max GLYMA04G04641 I 0.792
Lus10024823.g Linum usitatissimum Lus10024823.g I 0.792
Gorai.009G216900 Gossypium raimondii Gorai.009G216900 I 0.771
estExt_fgenesh1_kg.C_550007 Physcomitrella patens estExt_fgenesh1_kg.C_550007 I 0.771
Solyc04g078300.2 Solanum lycopersicum Solyc04g078300.2 I 0.771
30170.m013776 Ricinus communis 30170.m013776 I 0.771
VIT_18s0001g09540 Vitis vinifera VIT_18s0001g09540 I 0.771
cassava25616.m1 Manihot esculenta cassava25616.m1 I 0.771
Gorai.005G100600 Gossypium raimondii Gorai.005G100600 I 0.771
Lus10018714.g Linum usitatissimum Lus10018714.g I 0.771
estExt_gwp_gw1.C_900087 Physcomitrella patens estExt_gwp_gw1.C_900087 I 0.771
ORUFI08G21330 Oryza rufipogon ORUFI08G21330 I 0.750
ORGLA08G0167200 Oryza glaberrima ORGLA08G0167200 I 0.750
OS08G0494100 Oryza sativa OS08G0494100 I 0.750
POPTR_0002s09290 Populus trichocarpa POPTR_0002s09290 I 0.750
fgenesh1_pg.scaffold_163000049 Physcomitrella patens fgenesh1_pg.scaffold_163000049 I 0.750
Si013985m.g Setaria italica Si013985m.g I 0.750
cassava32041.m1 Manihot esculenta cassava32041.m1 I 0.750
e_gw1.273.6.1 Physcomitrella patens e_gw1.273.6.1 I 0.750
e_gw1.55.5.1 Physcomitrella patens e_gw1.55.5.1 I 0.750
PRUPE_ppa023054mg Prunus persica PRUPE_ppa023054mg I 0.750
estExt_fgenesh1_pg.C_1180093 Physcomitrella patens estExt_fgenesh1_pg.C_1180093 I 0.750
estExt_fgenesh1_pm.C_80015 Physcomitrella patens estExt_fgenesh1_pm.C_80015 I 0.750
mgf017317m Mimulus guttatus mgf017317m I 0.750
OGLUM08G20110 Oryza glumaepatula OGLUM08G20110 I 0.750
Pavir.Fb01739 Panicum virgatum Pavir.Fb01739 I 0.750
OBART08G19110 Oryza barthii OBART08G19110 I 0.750
LPERR08G16000 Leersia perrieri LPERR08G16000 I 0.750
Pm005355 Prunus mume Pm005355 I 0.750
BGIOSGA026745 Oryza indica BGIOSGA026745 I 0.750
SapurV1A.0010s0340 Salix purpurea SapurV1A.0010s0340 I 0.750
Aquca_014_00554 Aquilegia coerulea Aquca_014_00554 I 0.750
OPUNC08G17110 Oryza punctata OPUNC08G17110 I 0.750
orange1.1g046530m.g Citrus sinensis orange1.1g046530m.g I 0.750
Ciclev10001730m.g Citrus clementina Ciclev10001730m.g I 0.750
Pavir.J32837 Panicum virgatum Pavir.J32837 I 0.750
GSMUA_Achr3G04450_001 Musa acuminata GSMUA_Achr3G04450_001 I 0.750
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.739
Pm024895 Prunus mume Pm024895 I 0.739
Pm019181 Prunus mume Pm019181 I 0.729
29908.m005982 Ricinus communis 29908.m005982 I 0.729
MDP0000152821 Malus domestica MDP0000152821 I 0.729
Ciclev10003964m.g Citrus clementina Ciclev10003964m.g I 0.729
estExt_gwp_gw1.C_340302 Physcomitrella patens estExt_gwp_gw1.C_340302 I 0.729
gene31290-v1.0-hybrid Fragaria vesca gene31290-v1.0-hybrid I 0.729
estExt_Genewise1.C_80073 Physcomitrella patens estExt_Genewise1.C_80073 I 0.729
orange1.1g039560m.g Citrus sinensis orange1.1g039560m.g I 0.729
MDP0000243965 Malus domestica MDP0000243965 I 0.729
Pavir.Db01574 Panicum virgatum Pavir.Db01574 I 0.729
TCM_034970 Theobroma cacao TCM_034970 I 0.729
GSMUA_Achr9G13010_001 Musa acuminata GSMUA_Achr9G13010_001 I 0.729
GRMZM2G334225 Zea mays GRMZM2G334225 I 0.729
GRMZM2G152415 Zea mays GRMZM2G152415 I 0.729
PRUPE_ppa007816mg Prunus persica PRUPE_ppa007816mg I 0.729
Cla014721 Citrullus lanatus Cla014721 I 0.729
ONIVA08G21050 Oryza nivara ONIVA08G21050 I 0.729
OB08G26170 Oryza brachyantha OB08G26170 I 0.729
OLONG_004474 Oryza longistaminata OLONG_004474 I 0.729
LPERR06G07270 Leersia perrieri LPERR06G07270 I 0.729
PRUPE_ppa020874mg Prunus persica PRUPE_ppa020874mg I 0.729
GLYMA14G34160 Glycine max GLYMA14G34160 I 0.729
TCM_034757 Theobroma cacao TCM_034757 I 0.729
AMTR_s00010p00214260 Amborella trichopoda AMTR_s00010p00214260 I 0.729
VIT_07s0031g01140 Vitis vinifera VIT_07s0031g01140 I 0.729
Ca_24539 Cicer arietinum Ca_24539 I 0.729
Sb10g007810 Sorghum bicolor Sb10g007810 I 0.729
TCM_001182 Theobroma cacao TCM_001182 I 0.729
Si008439m.g Setaria italica Si008439m.g I 0.729
OPUNC09G14150 Oryza punctata OPUNC09G14150 I 0.727
Lus10016810.g Linum usitatissimum Lus10016810.g I 0.708
Lus10022506.g Linum usitatissimum Lus10022506.g I 0.708
GLYMA13G02170 Glycine max GLYMA13G02170 I 0.708
OB06G17440 Oryza brachyantha OB06G17440 I 0.708
SapurV1A.0293s0130 Salix purpurea SapurV1A.0293s0130 I 0.708
GSMUA_Achr10G21480_001 Musa acuminata GSMUA_Achr10G21480_001 I 0.708
MDP0000193129 Malus domestica MDP0000193129 I 0.708
BGIOSGA003731 Oryza indica BGIOSGA003731 I 0.708
Carubv10010907m.g Capsella rubella Carubv10010907m.g I 0.708
OS06G0223300 Oryza sativa OS06G0223300 I 0.708
ORUFI06G08110 Oryza rufipogon ORUFI06G08110 I 0.708
POPTR_0007s05980 Populus trichocarpa POPTR_0007s05980 I 0.708
SELMODRAFT_449720 Selaginella moellendorffii SELMODRAFT_449720 N 0.708
cassava22012.m1 Manihot esculenta cassava22012.m1 I 0.708
SELMODRAFT_449721 Selaginella moellendorffii SELMODRAFT_449721 N 0.708
ORGLA06G0074200 Oryza glaberrima ORGLA06G0074200 I 0.708
OPUNC06G07570 Oryza punctata OPUNC06G07570 I 0.708
Gorai.005G093000 Gossypium raimondii Gorai.005G093000 I 0.708
OGLUM06G08350 Oryza glumaepatula OGLUM06G08350 I 0.708
OMERI08G15140 Oryza meridionalis OMERI08G15140 I 0.708
ONIVA06G09080 Oryza nivara ONIVA06G09080 I 0.708
Cagra.1707s0007 Capsella grandiflora Cagra.1707s0007 I 0.708
OBART06G07860 Oryza barthii OBART06G07860 I 0.708