TC010850 (Tribolium castaneum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TC010850 T256418_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mef2
M08214_2.00
Drosophila melanogaster
YTAWWWWTAR

YTAWWWWTAR
ChIP-seq
Contrino et al.(2012)
Mf26
0.930 0.930
MEF2A
M03340_2.00
Homo sapiens
KCTAWAAATAGM

KCTATTTWTAGM
SELEX
Jolma et al.(2013)
MEF2A_1
0.837 0.837
MEF2A
M07979_2.00
Homo sapiens
NDDHYAAAAATARHH

DDYTATTTTTRDHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha
0.837 0.837
MEF2A
M08212_2.00
Homo sapiens
CTAWWWWTAG

CTAWWWWTAG
ChIP-seq
Contrino et al.(2012)
Mv88
0.837 0.837
MEF2A
M08213_2.00
Homo sapiens
AAAATAGM

KCTATTTT
ChIP-seq
Contrino et al.(2012)
Mv90
0.837 0.837
MEF2A
M09247_2.00
Homo sapiens
DYYAAAAATAGMH

DKCTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A
0.837 0.837
Mef2a
M09255_2.00
Mus musculus
DDCYAWAAATARMH

DKYTATTTWTRGHH
Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A
0.837 0.837
Mef2a
M09599_2.00
Mus musculus
CYNDAAATAG

CTATTTHNRG
Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529
0.837 0.837
MEF2A
M10933_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AMEF2_Q6
0.837 0.837
MEF2A
M10934_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMEF2_Q6
0.837 0.837
MEF2A
M10935_2.00
Homo sapiens
BTCTAAAAATAACYCY

RGRGTTATTTTTAGAV
Transfac
Matys et al.(2006)
V$MEF2_01
0.837 0.837
MEF2A
M10936_2.00
Homo sapiens
BNNNDDDCTAWAAATAGMHNNN

NNNDKCTATTTWTAGHHHNNNV
Transfac
Matys et al.(2006)
V$MEF2_02
0.837 0.837
MEF2A
M10937_2.00
Homo sapiens
NNNNDWKCTAWAAATAGMHHNN

NNDDKCTATTTWTAGMWHNNNN
Transfac
Matys et al.(2006)
V$MEF2_03
0.837 0.837
MEF2A
M10938_2.00
Homo sapiens
NVTGTTRCTAWAAATAGAAHHN

NDDWTCTATTTWTAGYAACABN
Transfac
Matys et al.(2006)
V$MEF2_04
0.837 0.837
MEF2A
M10939_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_05
0.837 0.837
MEF2A
M10940_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_Q6
0.837 0.837
MEF2A
M10941_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2_Q6_02
0.837 0.837
MEF2A
M10942_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MMEF2_Q6
0.837 0.837
MEF2A
M10943_2.00
Homo sapiens
NDKCTAWAAATAGMHH

DDKCTATTTWTAGMHN
Transfac
Matys et al.(2006)
V$RSRFC4_01
0.837 0.837
MEF2A
M10944_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RSRFC4_Q2
0.837 0.837
MEF2D
M03343_2.00
Homo sapiens
DCTAWAAATAGM

KCTATTTWTAGH
SELEX
Jolma et al.(2013)
MEF2D_1
0.814 0.814
MEF2C
M02745_2.00
Homo sapiens
TWCTAWAAATAG

CTATTTWTAGWA
SELEX
Jolma et al.(2010)
MEF2C_dimer
0.814 0.814
MEF2C
M05551_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_HT-SELEX
0.814 0.814
MEF2D
M05555_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX
0.814 0.814
MEF2C
M08149_2.00
Homo sapiens
NDDMYAAAAATAGMH

DKCTATTTTTRKHHN
ChIP-seq
Mathelier et al.(2014)
MA0497.1
0.814 0.814
MEF2C
M07980_2.00
Homo sapiens
NDDYYAAAAATAGHH

DDCTATTTTTRRHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2C_HudsonAlpha
0.814 0.814
MEF2C
M09248_2.00
Homo sapiens
DYYAAAAATARMH

DKYTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2C_HUMAN.H11MO.0.A
0.814 0.814
MEF2D
M09250_2.00
Homo sapiens
CTAWAAATAGMH

DKCTATTTWTAG
Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A
0.814 0.814
Mef2c
M09253_2.00
Mus musculus
DDMYAAAAATAGMHN

NDKCTATTTTTRKHH
Misc
Kulakovskiy et al.(2013)
MEF2C_MOUSE.H11MO.0.A
0.814 0.814
Mef2d
M09252_2.00
Mus musculus
DDCTAWAAATAGMH

DKCTATTTWTAGHH
Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A
0.814 0.814
MEF2C
M09597_2.00
Homo sapiens
DHYWDAAATARM

KYTATTTHWRDH
Misc
Heinz et al.(2010)
GM12878-Mef2c_GSE32465
0.814 0.814
MEF2C
M10945_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_02
0.814 0.814
MEF2C
M10946_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_Q4
0.814 0.814
MEF2D
M10957_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2D_Q4
0.814 0.814
MEF2C
M05552_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_Methyl-HT-SELEX
0.814 0.814
MEF2D
M05556_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX
0.814 0.814
MEF2B
M03344_2.00
Homo sapiens
RCTAWAAATAGM

KCTATTTWTAGY
SELEX
Jolma et al.(2013)
MEF2B_1
0.791 0.791
MEF2B
M05557_2.00
Homo sapiens
CYNDWWWHGG

CCDWWWHNRG
SELEX
Yin et al.(2017)
MEF2B_eDBD_HT-SELEX
0.791 0.791
MEF2B
M05559_2.00
Homo sapiens
CCVDWTATGGTAACA

TGTTACCATAWHBGG
SELEX
Yin et al.(2017)
MEF2B_FL_HT-SELEX
0.791 0.791
MEF2B
M09251_2.00
Homo sapiens
CYWAAAATAGHHHH

DDDDCTATTTTWRG
Misc
Kulakovskiy et al.(2013)
MEF2B_HUMAN.H11MO.0.A
0.791 0.791
MEF2B
M05558_2.00
Homo sapiens
CYWWWWWNGG

CCNWWWWWRG
SELEX
Yin et al.(2017)
MEF2B_eDBD_Methyl-HT-SELEX
0.791 0.791
MEF2B
M05560_2.00
Homo sapiens
CCVDATATGGTAACR

YGTTACCATATHBGG
SELEX
Yin et al.(2017)
MEF2B_FL_Methyl-HT-SELEX
0.791 0.791
Mef2b
M10958_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2B_02
0.744 0.744
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC010850-PA MADS box 175 217

Links

Other MADS box family TFs
Other Tribolium castaneum TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANIA_06293 Aspergillus nidulans CADANIAG00010534 N 0.000
EURHEDRAFT_513555 Aspergillus ruber EURHEDRAFT_513555 N 0.000
M437DRAFT_14214 Aureobasidium melanogenum M437DRAFT_14214 N 0.000
AUEXF2481DRAFT_349637 Aureobasidium subglaciale AUEXF2481DRAFT_349637 N 0.000
Bcin14g05090 Botrytis cinerea Bcin14g05090 N 0.000
PV04_07332 Capronia semiimmersa PV04_07332 N 0.000
CERSUDRAFT_114695 Ceriporiopsis subvermispora CERSUDRAFT_114695 I 0.000
PV07_11052 Cladophialophora immunda PV07_11052 N 0.000
CIMG_05220 Coccidioides immitis CIMG_05220 N 0.000
CPC735_064880 Coccidioides posadasii CPC735_064880 N 0.000
CCM_08978 Cordyceps militaris CCM_08978 I 0.000
DACRYDRAFT_22521 Dacryopinax sp DACRYDRAFT_22521 I 0.000
PV10_03194 Exophiala mesophila PV10_03194 N 0.000
PV06_09439 Exophiala oligosperma PV06_09439 N 0.000
PV11_09075 Exophiala sideris PV11_09075 N 0.000
PV05_10153 Exophiala xenobiotica PV05_10153 N 0.000
FFUJ_03763 Fusarium fujikuroi FFUJ_03763 I 0.000
FGRRES_01562 Fusarium graminearum FGRRES_01562 I 0.000
FOXG_11146 Fusarium oxysporum FOXG_11146 I 0.000
NechaG65166 Fusarium solani NechaG65166 I 0.000
GGTG_11194 Gaeumannomyces graminis GGTG_11194 I 0.000
MAPG_00750 Magnaporthe poae MAPG_00750 I 0.000
MBR_06803 Metarhizium brunneum MBR_06803 I 0.000
MGU_04562 Metarhizium guizhouense MGU_04562 I 0.000
MAJ_06041 Metarhizium majus MAJ_06041 I 0.000
X797_000023 Metarhizium robertsii X797_000023 I 0.000
MCYG_04265 Microsporum canis MCYG_04265 N 0.000
e_gw1.3.1744.1 Mucor circinelloides e_gw1.3.1744.1 N 0.000
estExt_fgeneshMC_pg.C_30927 Mucor circinelloides estExt_fgeneshMC_pg.C_30927 N 0.000
estExt_Genewise1Plus.C_sca_8_chr1_1_00440 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00440 I 0.000
OIDMADRAFT_194965 Oidiodendron maius OIDMADRAFT_194965 I 0.000
OCS_05478 Ophiocordyceps sinensis OCS_05478 I 0.000
fgeneshPB_pg.14__231 Phycomyces blakesleeanus fgeneshPB_pg.14__231 N 0.000
V565_176590 Rhizoctonia solani V565_176590 I 0.000
RO3G_02623 Rhizopus oryzae RO3G_02623 N 0.000
M408DRAFT_332528 Serendipita vermifera M408DRAFT_332528 I 0.000
M422DRAFT_232009 Sphaerobolus stellatus M422DRAFT_232009 N 0.000
SPPG_00605 Spizellomyces punctatus SPPG_00605 N 0.000
K437DRAFT_291790 Tilletiaria anomala K437DRAFT_291790 N 0.000
VHEMI05725 Torrubiella hemipterigena VHEMI05725 I 0.000
TRIREDRAFT_78799 Trichoderma reesei TRIREDRAFT_78799 I 0.000
TESG_01285 Trichophyton tonsurans TESG_01285 N 0.000