TCM_000878 (Theobroma cacao)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TCM_000878 T256422_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOX91804 MADS box 45 91

Links

Other MADS box family TFs
Other Theobroma cacao TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.702
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.702
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.729
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
MDP0000168914 Malus domestica MDP0000168914 N 0.702
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.708
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.702
cassava2847.m1 Manihot esculenta cassava2847.m1 N 0.724
29613.m000367 Ricinus communis 29613.m000367 N 0.702
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.729
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.745
PRUPE_ppb022733mg Prunus persica PRUPE_ppb022733mg N 0.729
VIT_00s0386g00010 Vitis vinifera VIT_00s0386g00010 N 0.766
Ca_07607 Cicer arietinum Ca_07607 N 0.729
Ca_26354 Cicer arietinum Ca_26354 N 0.729
Pm002317 Prunus mume Pm002317 N 0.708
28830.m000229 Ricinus communis 28830.m000229 N 0.750
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.729