TCM_014051 (Theobroma cacao)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TCM_014051 T256446_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY21890 MADS box 10 57
EOY21891 MADS box 10 57

Links

Other MADS box family TFs
Other Theobroma cacao TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.938
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.938
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.938
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.938
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.938
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.938
30138.m004061 Ricinus communis 30138.m004061 I 0.917
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.917
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.917
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.917
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.896
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.894
AGL65 Arabidopsis thaliana AT1G18750 D 0.875
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.875
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.875
Bra016544 Brassica rapa Bra016544 I 0.875
Bo8g104060 Brassica oleracea Bo8g104060 I 0.875
Bo8g068060 Brassica oleracea Bo8g068060 I 0.875
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.875
PK21701.1 Cannabis sativa PK21701.1 I 0.875
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.875
Bra031049 Brassica rapa Bra031049 I 0.875
Bra025685 Brassica rapa Bra025685 I 0.872
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.872
F775_13266 Aegilops tauschii F775_13266 I 0.870
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.870
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.870
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.870
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.870
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.870
MDP0000193129 Malus domestica MDP0000193129 I 0.854
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.854
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.848
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.848
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.848
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.848
Pm024895 Prunus mume Pm024895 I 0.848
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.833
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.833
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.826
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.826
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.812
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.812
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.812
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.809
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.809
Cla010361 Citrullus lanatus Cla010361 I 0.804
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.804
mgf004425m Mimulus guttatus mgf004425m I 0.792
mgf000945m Mimulus guttatus mgf000945m I 0.792
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.783
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.783
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.783
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.783
PGSC0003DMG400019525 Solanum tuberosum PGSC0003DMG400019525 N 0.766
OS11G0658700 Oryza sativa OS11G0658700 N 0.761
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.761
29813.m001508 Ricinus communis 29813.m001508 I 0.761
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.761
Si028357m.g Setaria italica Si028357m.g N 0.761
MDP0000146231 Malus domestica MDP0000146231 I 0.761
OBART11G21780 Oryza barthii OBART11G21780 N 0.761
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.750
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.750
Cla018884 Citrullus lanatus Cla018884 I 0.750
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.739
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.739
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.739
Pm006479 Prunus mume Pm006479 I 0.739
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.739
TCM_011687 Theobroma cacao TCM_011687 I 0.739
Ca_18082 Cicer arietinum Ca_18082 I 0.739
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.739
MDP0000773068 Malus domestica MDP0000773068 I 0.733
MDP0000919323 Malus domestica MDP0000919323 I 0.733
MDP0000146415 Malus domestica MDP0000146415 I 0.733
Carubv10021590m.g Capsella rubella Carubv10021590m.g I 0.729
AGL66 Arabidopsis thaliana AT1G77980 I 0.729
AGL33 Populus trichocarpa POPTR_0018s08400 N 0.729
AGL66 Arabidopsis lyrata fgenesh2_kg.2__2091__AT1G77980.1 I 0.729
Cagra.0096s0037 Capsella grandiflora Cagra.0096s0037 I 0.729
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.723
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.717
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.717
Ca_16376 Cicer arietinum Ca_16376 I 0.717
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.717
PK03147.1 Cannabis sativa PK03147.1 I 0.708
Bra016386 Brassica rapa Bra016386 I 0.708
Bra015643 Brassica rapa Bra015643 I 0.708
Bo8g071330 Brassica oleracea Bo8g071330 I 0.708
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.708
Bra012308 Brassica rapa Bra012308 I 0.708
Thhalv10019686m.g Eutrema salsugineum Thhalv10019686m.g I 0.708
Bo6g121640 Brassica oleracea Bo6g121640 I 0.708
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.708
Bostr.20129s0232 Boechera stricta Bostr.20129s0232 I 0.708
Pm019181 Prunus mume Pm019181 I 0.708
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.708
29908.m005982 Ricinus communis 29908.m005982 I 0.708
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.708
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.708
Bo7g060150 Brassica oleracea Bo7g060150 I 0.708
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.708
MTR_4g084740 Medicago truncatula MTR_4g084740 I 0.708
MDP0000147667 Malus domestica MDP0000147667 I 0.708
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.708
OB08G26170 Oryza brachyantha OB08G26170 I 0.708
AGL104 Arabidopsis lyrata Al_scaffold_0001_2320 I 0.708
AGL104 Arabidopsis thaliana AT1G22130 I 0.708
PRUPE_ppa007816mg Prunus persica PRUPE_ppa007816mg I 0.708