CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_036473
(
Theobroma cacao
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
TCM_036473
T256481_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY17312
MADS box
10
54
LISNESARKVTLKKRKAGLWKKLNELTTLCGVAACAIIFSTYDAQ
Links
Other
MADS box
family TFs
Other
Theobroma cacao
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.009G302800
Gossypium raimondii
Gorai.009G302800
N
0.800
SapurV1A.0690s0130
Salix purpurea
SapurV1A.0690s0130
N
0.778
AGL87
Populus trichocarpa
POPTR_0013s11210
N
0.778
cassava38612.m1
Manihot esculenta
cassava38612.m1
N
0.756
TCM_021050
Theobroma cacao
TCM_021050
N
0.756
orange1.1g040635m.g
Citrus sinensis
orange1.1g040635m.g
N
0.711
cassava15247.m1
Manihot esculenta
cassava15247.m1
I
0.711
Ciclev10003090m.g
Citrus clementina
Ciclev10003090m.g
N
0.711