CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_037394
(
Theobroma cacao
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
TCM_037394
T256484_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY30051
MADS box
10
57
RLESAKARQAKYSKRKAGLVKKAKELAILCDVDLALLLFSPTDKPTLF
Links
Other
MADS box
family TFs
Other
Theobroma cacao
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL33
Populus trichocarpa
POPTR_0018s08400
N
0.812
SapurV1A.0435s0010
Salix purpurea
SapurV1A.0435s0010
N
0.771
Gorai.010G096200
Gossypium raimondii
Gorai.010G096200
N
0.750
Gorai.012G090200
Gossypium raimondii
Gorai.012G090200
N
0.729
Gorai.010G096100
Gossypium raimondii
Gorai.010G096100
N
0.729
Gorai.012G090000
Gossypium raimondii
Gorai.012G090000
N
0.729
Ciclev10010259m.g
Citrus clementina
Ciclev10010259m.g
N
0.729
29739.m003627
Ricinus communis
29739.m003627
N
0.708
Gorai.012G090300
Gossypium raimondii
Gorai.012G090300
N
0.708