CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2BL_ABBC40952
(
Triticum aestivum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Traes_2BL_ABBC40952
T256530_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2BL_ABBC40952.1
MADS box
12
60
RIEDRRRRGICFRKRRAGLVKKAEELAVLCDAHVGLLVINPFDGTFQRF
Links
Other
MADS box
family TFs
Other
Triticum aestivum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2DL_3C9A3DD05
Triticum aestivum
Traes_2DL_3C9A3DD05
N
0.979
F775_33065
Aegilops tauschii
F775_33065
N
0.979
Traes_2AL_0C169500B
Triticum aestivum
Traes_2AL_0C169500B
N
0.938
TRIUR3_28009
Triticum urartu
TRIUR3_28009
N
0.833
BRADI5G08027
Brachypodium distachyon
BRADI5G08027
N
0.792
LPERR04G07290
Leersia perrieri
LPERR04G07290
N
0.750
OPUNC04G08530
Oryza punctata
OPUNC04G08530
N
0.750
ORGLA02G0342800
Oryza glaberrima
ORGLA02G0342800
N
0.729
ORGLA04G0074800
Oryza glaberrima
ORGLA04G0074800
N
0.729
ORGLA02G0353300
Oryza glaberrima
ORGLA02G0353300
N
0.729
ONIVA04G08280
Oryza nivara
ONIVA04G08280
N
0.729
OGLUM04G10090
Oryza glumaepatula
OGLUM04G10090
N
0.729
ONIVA04G08300
Oryza nivara
ONIVA04G08300
N
0.729
OMERI04G09520
Oryza meridionalis
OMERI04G09520
N
0.729
OBART04G10400
Oryza barthii
OBART04G10400
N
0.729
OGLUM04G10110
Oryza glumaepatula
OGLUM04G10110
N
0.708
OLONG_018307
Oryza longistaminata
OLONG_018307
N
0.708
BGIOSGA016270
Oryza indica
BGIOSGA016270
N
0.708
ORUFI04G11600
Oryza rufipogon
ORUFI04G11600
N
0.708