CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRAES3BF048900050CFD_g
(
Triticum aestivum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
TRAES3BF048900050CFD_g
T256546_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRAES3BF048900050CFD_t1
MADS box
10
57
RIDNPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYQY
Links
Other
MADS box
family TFs
Other
Triticum aestivum
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_80902
Hordeum vulgare
MLOC_80902
N
1.000
F775_28377
Aegilops tauschii
F775_28377
N
1.000
Traes_3AL_219064574
Triticum aestivum
Traes_3AL_219064574
N
1.000
BRADI2G48690
Brachypodium distachyon
BRADI2G48690
N
0.958
BGIOSGA000892
Oryza indica
BGIOSGA000892
N
0.938
OPUNC01G29290
Oryza punctata
OPUNC01G29290
N
0.938
MADS32
Oryza sativa
OS01G0726400
N
0.938
OGLUM01G33550
Oryza glumaepatula
OGLUM01G33550
N
0.938
ORUFI01G32600
Oryza rufipogon
ORUFI01G32600
N
0.938
ORGLA01G0242900
Oryza glaberrima
ORGLA01G0242900
N
0.938
ONIVA01G33710
Oryza nivara
ONIVA01G33710
N
0.938
OBART01G29490
Oryza barthii
OBART01G29490
N
0.938
LPERR01G25340
Leersia perrieri
LPERR01G25340
N
0.938
OB01G38450
Oryza brachyantha
OB01G38450
N
0.938
GRMZM2G079727
Zea mays
GRMZM2G079727
N
0.917
GSMUA_Achr9G05780_001
Musa acuminata
GSMUA_Achr9G05780_001
N
0.917
Pavir.Ea02667
Panicum virgatum
Pavir.Ea02667
N
0.896
Pavir.Eb02653
Panicum virgatum
Pavir.Eb02653
N
0.896
Si002988m.g
Setaria italica
Si002988m.g
N
0.896
GRMZM2G001139
Zea mays
GRMZM2G001139
N
0.896
Sb03g033380
Sorghum bicolor
Sb03g033380
N
0.896
PDK_20s13009472g001
Phoenix dactylifera
PDK_20s13009472g001
N
0.875
PK10594.1
Cannabis sativa
PK10594.1
I
0.708
Traes_7DS_05F0F0B64
Triticum aestivum
Traes_7DS_05F0F0B64
I
0.708
F775_25533
Aegilops tauschii
F775_25533
I
0.708
Traes_7DS_366A869CF
Triticum aestivum
Traes_7DS_366A869CF
I
0.707