TRAES3BF106100060CFD_g (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TRAES3BF106100060CFD_g T256550_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MAD55_ORYSJ
M10962_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS55_01 		0.708 0.708
Q4U0F1_WHEAT
M10978_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAVRT2_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRAES3BF106100060CFD_t1 MADS box 24 71

Links

Other MADS box family TFs
Other Triticum aestivum TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04223 Aegilops tauschii F775_04223 I 1.000
F775_43210 Aegilops tauschii F775_43210 I 0.958
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.958
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.896
Si019951m.g Setaria italica Si019951m.g I 0.896
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.896
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.896
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.896
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.896
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.875
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.854
OBART01G45740 Oryza barthii OBART01G45740 N 0.854
OBART09G00850 Oryza barthii OBART09G00850 N 0.854
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.854
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.854
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.854
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.854
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.854
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.854
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.854
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.854
OS09G0116800 Oryza sativa OS09G0116800 N 0.854
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.854
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.854
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.854
OS01G0975800 Oryza sativa OS01G0975800 N 0.854
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.854
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.854
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.854
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.854
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.854
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.833
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.828
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.812
BRADI4G39420 Brachypodium distachyon BRADI4G39420 N 0.812
OB01G55160 Oryza brachyantha OB01G55160 N 0.812
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.792
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.792
AMTR_s00025p00244880 Amborella trichopoda AMTR_s00025p00244880 N 0.771
Bra026764 Brassica rapa Bra026764 N 0.771
GRMZM2G459864 Zea mays GRMZM2G459864 N 0.771
Si038960m.g Setaria italica Si038960m.g N 0.771
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.771
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.771
BRADI2G26320 Brachypodium distachyon BRADI2G26320 N 0.750
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.750
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.750
Pavir.Bb00803 Panicum virgatum Pavir.Bb00803 N 0.750
Sb07g007306 Sorghum bicolor Sb07g007306 N 0.750
Sb07g007373 Sorghum bicolor Sb07g007373 N 0.750
SELMODRAFT_450772 Selaginella moellendorffii SELMODRAFT_450772 N 0.750
SELMODRAFT_450776 Selaginella moellendorffii SELMODRAFT_450776 N 0.750
F775_23542 Aegilops tauschii F775_23542 N 0.750
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.750
MLOC_55767 Hordeum vulgare MLOC_55767 N 0.750
gw1.81.151.1 Physcomitrella patens gw1.81.151.1 N 0.750
F775_23176 Aegilops tauschii F775_23176 N 0.750
SELMODRAFT_450777 Selaginella moellendorffii SELMODRAFT_450777 N 0.750
gw1.88.220.1 Physcomitrella patens gw1.88.220.1 N 0.750
SELMODRAFT_450775 Selaginella moellendorffii SELMODRAFT_450775 N 0.750
F775_21960 Aegilops tauschii F775_21960 N 0.733
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.732
ORUFI06G14240 Oryza rufipogon ORUFI06G14240 N 0.729
ORUFI02G05030 Oryza rufipogon ORUFI02G05030 N 0.729
29613.m000367 Ricinus communis 29613.m000367 N 0.729
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.729
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.729
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.729
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.729
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.729
Si032189m.g Setaria italica Si032189m.g N 0.729
Sb06g015640 Sorghum bicolor Sb06g015640 N 0.729
Sb0836s002010 Sorghum bicolor Sb0836s002010 N 0.729
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.729
Sb02g006700 Sorghum bicolor Sb02g006700 N 0.729
OPUNC09G08220 Oryza punctata OPUNC09G08220 N 0.729
BRADI3G18670 Brachypodium distachyon BRADI3G18670 N 0.729
OGLUM02G04740 Oryza glumaepatula OGLUM02G04740 N 0.729
OLONG_015132 Oryza longistaminata OLONG_015132 N 0.729
ONIVA02G05120 Oryza nivara ONIVA02G05120 N 0.729
F775_52426 Aegilops tauschii F775_52426 N 0.729
OB06G21580 Oryza brachyantha OB06G21580 N 0.729
GSMUA_Achr8G09250_001 Musa acuminata GSMUA_Achr8G09250_001 I 0.729
GRMZM2G472100 Zea mays GRMZM2G472100 N 0.729
ORGLA06G0273400 Oryza glaberrima ORGLA06G0273400 N 0.729
ONIVA06G15960 Oryza nivara ONIVA06G15960 N 0.729
BRADI1G20090 Brachypodium distachyon BRADI1G20090 N 0.729
AGL61 Arabidopsis thaliana AT2G24840 N 0.729
OPUNC06G12720 Oryza punctata OPUNC06G12720 N 0.729
ORGLA02G0045500 Oryza glaberrima ORGLA02G0045500 N 0.729
BGIOSGA007600 Oryza indica BGIOSGA007600 N 0.729
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.729
BGIOSGA022830 Oryza indica BGIOSGA022830 N 0.729
OBART02G04930 Oryza barthii OBART02G04930 N 0.724
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.721
mgf018529m Mimulus guttatus mgf018529m N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.708
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708
Bo4g157220 Brassica oleracea Bo4g157220 N 0.708
30099.m001671 Ricinus communis 30099.m001671 N 0.708
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
MAD55_ORYSJ Oryza sativa MAD55_ORYSJ D 0.708
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
BRADI1G45807 Brachypodium distachyon BRADI1G45807 I 0.708
BGIOSGA021662 Oryza indica BGIOSGA021662 I 0.708
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.708
BGIOSGA030219 Oryza indica BGIOSGA030219 N 0.708
Bra007829 Brassica rapa Bra007829 N 0.708
TRIUR3_22433 Triticum urartu TRIUR3_22433 N 0.708
ONIVA09G00820 Oryza nivara ONIVA09G00820 N 0.708
Q4U0F1_WHEAT Triticum aestivum Q4U0F1_WHEAT D 0.708
Sb02g006710 Sorghum bicolor Sb02g006710 N 0.708
OMERI06G08590 Oryza meridionalis OMERI06G08590 I 0.708
OMERI02G05750 Oryza meridionalis OMERI02G05750 N 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.708
OPUNC06G07080 Oryza punctata OPUNC06G07080 I 0.708
ORGLA06G0069900 Oryza glaberrima ORGLA06G0069900 I 0.708
OS06G0217300 Oryza sativa OS06G0217300 I 0.708
OS09G0116000 Oryza sativa OS09G0116000 N 0.708
OPUNC02G04080 Oryza punctata OPUNC02G04080 N 0.708
OGLUM06G14250 Oryza glumaepatula OGLUM06G14250 N 0.708
OBART09G00790 Oryza barthii OBART09G00790 N 0.708
TRIUR3_03219 Triticum urartu TRIUR3_03219 I 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.708
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.708
Ca_04665 Cicer arietinum Ca_04665 N 0.708
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Cla009921 Citrullus lanatus Cla009921 N 0.708
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.708
OBART06G13310 Oryza barthii OBART06G13310 N 0.708
OB08G28340 Oryza brachyantha OB08G28340 I 0.708
OB06G16920 Oryza brachyantha OB06G16920 I 0.708
TRAES3BF009000010CFD_g Triticum aestivum TRAES3BF009000010CFD_g I 0.708
Ca_26354 Cicer arietinum Ca_26354 N 0.708
Traes_7DL_A773A64E2 Triticum aestivum Traes_7DL_A773A64E2 N 0.707