Traes_4AL_72A03AD23 (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_4AL_72A03AD23 T256553_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		0.729 0.729
AGL42
M06995_2.00 		Arabidopsis thaliana
RATGATG
CATCATY		 Dap-seq
OMalley et al.(2016)
AGL42_col_a 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4AL_72A03AD23.1 MADS box 10 57

Links

Other MADS box family TFs
Other Triticum aestivum TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_7BL_F5B6736D0 Triticum aestivum Traes_7BL_F5B6736D0 I 0.958
Traes_1DS_A0312C264 Triticum aestivum Traes_1DS_A0312C264 I 0.833
F775_18161 Aegilops tauschii F775_18161 I 0.833
Traes_1BS_7366111C0 Triticum aestivum Traes_1BS_7366111C0 I 0.833
Traes_1AS_24511D656 Triticum aestivum Traes_1AS_24511D656 I 0.833
Traes_1BS_7366111C01 Triticum aestivum Traes_1BS_7366111C01 I 0.833
F775_08934 Aegilops tauschii F775_08934 I 0.812
F775_20565 Aegilops tauschii F775_20565 I 0.812
Traes_1AS_3232D5589 Triticum aestivum Traes_1AS_3232D5589 I 0.812
Traes_1DS_F70AAB507 Triticum aestivum Traes_1DS_F70AAB507 I 0.812
OS06G0347700 Oryza sativa OS06G0347700 I 0.771
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.771
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.771
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.771
AGL72 Arabidopsis thaliana AT5G51860 I 0.771
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.771
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.771
OBART06G14060 Oryza barthii OBART06G14060 I 0.771
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.771
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.771
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.771
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.771
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.771
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.771
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.771
LPERR04G11770 Leersia perrieri LPERR04G11770 I 0.750
AGL71 Arabidopsis thaliana AT5G51870 I 0.750
OB06G22200 Oryza brachyantha OB06G22200 I 0.750
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.750
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.750
Traes_2BL_3E613DE21 Triticum aestivum Traes_2BL_3E613DE21 I 0.750
BRADI5G12440 Brachypodium distachyon BRADI5G12440 I 0.750
Bra029155 Brassica rapa Bra029155 I 0.750
Traes_2DL_662837152 Triticum aestivum Traes_2DL_662837152 I 0.750
TRIUR3_19891 Triticum urartu TRIUR3_19891 I 0.750
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.750
Bra028283 Brassica rapa Bra028283 I 0.750
Traes_2AL_267502097 Triticum aestivum Traes_2AL_267502097 I 0.750
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.750
Bostr.15774s0333 Boechera stricta Bostr.15774s0333 I 0.750
F775_27066 Aegilops tauschii F775_27066 I 0.750
Cucsa.194800 Cucumis sativus Cucsa.194800 I 0.729
OPUNC02G19600 Oryza punctata OPUNC02G19600 I 0.729
OPUNC04G12890 Oryza punctata OPUNC04G12890 I 0.729
Cla006973 Citrullus lanatus Cla006973 I 0.729
AGL18 Vitis vinifera VIT_08s0007g08790 I 0.729
ORUFI02G22950 Oryza rufipogon ORUFI02G22950 I 0.729
ORGLA04G0120000 Oryza glaberrima ORGLA04G0120000 I 0.729
MADS27 Oryza sativa OS02G0579600 I 0.729
Si019337m.g Setaria italica Si019337m.g I 0.729
Cagra.4003s0006 Capsella grandiflora Cagra.4003s0006 I 0.729
Carubv10027142m.g Capsella rubella Carubv10027142m.g I 0.729
Thhalv10004954m.g Eutrema salsugineum Thhalv10004954m.g I 0.729
Sb06g019040 Sorghum bicolor Sb06g019040 I 0.729
Q9FVN1_MAIZE Zea mays Q9FVN1_MAIZE D 0.729
ONIVA04G13150 Oryza nivara ONIVA04G13150 I 0.729
OS04G0461300 Oryza sativa OS04G0461300 I 0.729
PGSC0003DMG400023729 Solanum tuberosum PGSC0003DMG400023729 I 0.729
ORUFI04G16410 Oryza rufipogon ORUFI04G16410 I 0.729
Sb04g024010 Sorghum bicolor Sb04g024010 I 0.729
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.729
BRADI3G46920 Brachypodium distachyon BRADI3G46920 I 0.729
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.729
GRMZM2G055782 Zea mays GRMZM2G055782 I 0.729
GRMZM2G316366 Zea mays GRMZM2G316366 I 0.729
BRADI3G00730 Brachypodium distachyon BRADI3G00730 I 0.729
ONIVA02G24100 Oryza nivara ONIVA02G24100 I 0.729
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.729
AMTR_s00109p00015260 Amborella trichopoda AMTR_s00109p00015260 I 0.729
BGIOSGA008494 Oryza indica BGIOSGA008494 I 0.729
Bo00946s010 Brassica oleracea Bo00946s010 I 0.729
Bo9g103660 Brassica oleracea Bo9g103660 I 0.729
LPERR02G17700 Leersia perrieri LPERR02G17700 I 0.729
Bra028282 Brassica rapa Bra028282 I 0.729
OMERI02G21410 Oryza meridionalis OMERI02G21410 I 0.729
OLONG_024179 Oryza longistaminata OLONG_024179 I 0.729
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.729
OB04G22330 Oryza brachyantha OB04G22330 I 0.729
OB02G29310 Oryza brachyantha OB02G29310 I 0.729
OGLUM02G22050 Oryza glumaepatula OGLUM02G22050 I 0.729
OLONG_016283 Oryza longistaminata OLONG_016283 I 0.729
OBART02G21870 Oryza barthii OBART02G21870 I 0.729
OBART04G15020 Oryza barthii OBART04G15020 I 0.729
LPERR08G12860 Leersia perrieri LPERR08G12860 I 0.729
AGL42 Arabidopsis thaliana AT5G62165 D 0.708
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.708
gene25618-v1.0-hybrid Fragaria vesca gene25618-v1.0-hybrid I 0.708
gene05027-v1.0-hybrid Fragaria vesca gene05027-v1.0-hybrid I 0.708
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.708
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.708
OGLUM04G14880 Oryza glumaepatula OGLUM04G14880 I 0.708
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.708
mgf025830m Mimulus guttatus mgf025830m I 0.708
Bo3g023570 Brassica oleracea Bo3g023570 I 0.708
Bostr.26833s0022 Boechera stricta Bostr.26833s0022 I 0.708
Bo1g007520 Brassica oleracea Bo1g007520 I 0.708
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.708
Bo2g162920 Brassica oleracea Bo2g162920 I 0.708
Lus10027404.g Linum usitatissimum Lus10027404.g I 0.708
MDP0000228942 Malus domestica MDP0000228942 I 0.708
Thhalv10005641m.g Eutrema salsugineum Thhalv10005641m.g I 0.708
ANR1 Arabidopsis thaliana AT2G14210 I 0.708
SapurV1A.0103s0250 Salix purpurea SapurV1A.0103s0250 I 0.708
OMERI08G12880 Oryza meridionalis OMERI08G12880 I 0.708
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.708
LjSGA_021013.1 Lotus japonicus LjSGA_021013.1 I 0.708
PK01421.1 Cannabis sativa PK01421.1 I 0.708
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I 0.708
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I 0.708
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.708
MDP0000783966 Malus domestica MDP0000783966 I 0.708
mgf021543m Mimulus guttatus mgf021543m I 0.708
Pavir.Aa01540 Panicum virgatum Pavir.Aa01540 I 0.708
Pavir.Ab02921 Panicum virgatum Pavir.Ab02921 I 0.708
Pavir.Ga00461 Panicum virgatum Pavir.Ga00461 I 0.708
Pavir.Fb01587 Panicum virgatum Pavir.Fb01587 I 0.708
Lus10031665.g Linum usitatissimum Lus10031665.g I 0.708
e_gw1.55.13.1 Physcomitrella patens e_gw1.55.13.1 I 0.708
Solyc01g106170.2 Solanum lycopersicum Solyc01g106170.2 I 0.708
Si019880m.g Setaria italica Si019880m.g I 0.708
GRMZM2G044408 Zea mays GRMZM2G044408 I 0.708
GRMZM2G032905 Zea mays GRMZM2G032905 I 0.708
GRMZM2G005155 Zea mays GRMZM2G005155 I 0.708
F775_15097 Aegilops tauschii F775_15097 I 0.708
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I 0.708
GLYMA02G33040 Glycine max GLYMA02G33040 I 0.708
Si012517m.g Setaria italica Si012517m.g I 0.708
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.708
Sb04g028960 Sorghum bicolor Sb04g028960 I 0.708
GSMUA_Achr3G07310_001 Musa acuminata GSMUA_Achr3G07310_001 I 0.708
PRUPE_ppa024736mg Prunus persica PRUPE_ppa024736mg I 0.708
GRMZM2G135018 Zea mays GRMZM2G135018 I 0.708
Sb06g028420 Sorghum bicolor Sb06g028420 I 0.708
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.708
Sb07g021110 Sorghum bicolor Sb07g021110 I 0.708
Traes_6AS_D6ABA1D79 Triticum aestivum Traes_6AS_D6ABA1D79 I 0.708
Traes_6DS_2BAD7A60A Triticum aestivum Traes_6DS_2BAD7A60A I 0.708
Pm021962 Prunus mume Pm021962 I 0.708
Pm019404 Prunus mume Pm019404 I 0.708
Cla023427 Citrullus lanatus Cla023427 I 0.708
Cucsa.104010 Cucumis sativus Cucsa.104010 I 0.708
Bra011509 Brassica rapa Bra011509 I 0.708
mgf018870m Mimulus guttatus mgf018870m I 0.708
fgenesh1_pg.scaffold_118000119 Physcomitrella patens fgenesh1_pg.scaffold_118000119 I 0.708
PRUPE_ppa019267mg Prunus persica PRUPE_ppa019267mg I 0.708
Cla014322 Citrullus lanatus Cla014322 I 0.708
Ca_21060 Cicer arietinum Ca_21060 I 0.708
Bra029281 Brassica rapa Bra029281 I 0.708
Bra035907 Brassica rapa Bra035907 I 0.708
TT16 Vitis vinifera VIT_01s0011g01560 I 0.708
Bra029154 Brassica rapa Bra029154 I 0.708
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.708
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.708
mgf019667m Mimulus guttatus mgf019667m I 0.708
gene22696-v1.0-hybrid Fragaria vesca gene22696-v1.0-hybrid I 0.702