Traes_6AS_9AA76345D (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_6AS_9AA76345D T256588_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MADS16
M10971_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS16_01
0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6AS_9AA76345D.1 MADS box 11 58

Links

Other MADS box family TFs
Other Triticum aestivum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRIUR3_33318 Triticum urartu TRIUR3_33318 I 1.000
F775_21044 Aegilops tauschii F775_21044 I 0.917
Traes_7BL_7F4124E70 Triticum aestivum Traes_7BL_7F4124E70 I 0.800
Traes_7AL_1C76E543C Triticum aestivum Traes_7AL_1C76E543C I 0.771
Traes_7DL_DDCC09B24 Triticum aestivum Traes_7DL_DDCC09B24 I 0.771
TRIUR3_29719 Triticum urartu TRIUR3_29719 I 0.771
MLOC_31575 Hordeum vulgare MLOC_31575 I 0.771
F775_30609 Aegilops tauschii F775_30609 I 0.759
Sb10g029810 Sorghum bicolor Sb10g029810 I 0.750
MADS16 Oryza sativa OS06G0712700 D 0.750
Traes_6BS_8F1EC63B9 Triticum aestivum Traes_6BS_8F1EC63B9 N 0.750
Pavir.J11672 Panicum virgatum Pavir.J11672 I 0.750
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I 0.750
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I 0.750
ONIVA06G29820 Oryza nivara ONIVA06G29820 I 0.750
OBART06G27230 Oryza barthii OBART06G27230 I 0.750
OB06G35020 Oryza brachyantha OB06G35020 I 0.750
LPERR06G22780 Leersia perrieri LPERR06G22780 I 0.750
GRMZM2G139073 Zea mays GRMZM2G139073 I 0.750
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I 0.750
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I 0.750
BGIOSGA020546 Oryza indica BGIOSGA020546 I 0.750
OMERI06G27290 Oryza meridionalis OMERI06G27290 I 0.750
OLONG_004226 Oryza longistaminata OLONG_004226 I 0.750
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I 0.729
Si007221m.g Setaria italica Si007221m.g I 0.729
OMERI06G24380 Oryza meridionalis OMERI06G24380 I 0.718
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.707