Traes_7AS_EFE436F1D (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_7AS_EFE436F1D T256607_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.729 0.729
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.729 0.729
AGL15
M06992_2.00 		Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN
NTTTCYWHWTTDGGWAANW		 Dap-seq
OMalley et al.(2016)
AGL15_col_a 		0.708 0.708
AGL15
M06993_2.00 		Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH
DDNTTTCYHHWTTDGGWAANH		 Dap-seq
OMalley et al.(2016)
AGL15_colamp_a 		0.708 0.708
AGL15
M10927_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_01 		0.708 0.708
AGL15
M10928_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL15_02 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7AS_EFE436F1D.1 MADS box 10 57

Links

Other MADS box family TFs
Other Triticum aestivum TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5DS_82FA431DB Triticum aestivum Traes_5DS_82FA431DB I 0.917
F775_15097 Aegilops tauschii F775_15097 I 0.896
TRIUR3_09266 Triticum urartu TRIUR3_09266 I 0.854
Traes_5AS_E9E60BA43 Triticum aestivum Traes_5AS_E9E60BA43 I 0.833
Traes_7BS_209950516 Triticum aestivum Traes_7BS_209950516 I 0.833
F775_15098 Aegilops tauschii F775_15098 I 0.812
Traes_7DS_7F8C88C92 Triticum aestivum Traes_7DS_7F8C88C92 I 0.812
Traes_7DS_7A30E1397 Triticum aestivum Traes_7DS_7A30E1397 I 0.792
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.771
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.771
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.771
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.771
OBART06G14060 Oryza barthii OBART06G14060 I 0.771
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.771
OS06G0347700 Oryza sativa OS06G0347700 I 0.771
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.771
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.771
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.771
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.750
OB06G22200 Oryza brachyantha OB06G22200 I 0.750
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I 0.750
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.750
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I 0.750
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I 0.750
Bra011509 Brassica rapa Bra011509 I 0.750
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I 0.750
Bo1g007520 Brassica oleracea Bo1g007520 I 0.750
Cla023427 Citrullus lanatus Cla023427 I 0.729
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.729
PRUPE_ppa019267mg Prunus persica PRUPE_ppa019267mg I 0.729
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.729
Bo7g116760 Brassica oleracea Bo7g116760 I 0.729
MDP0000254052 Malus domestica MDP0000254052 I 0.729
MDP0000156783 Malus domestica MDP0000156783 I 0.729
MDP0000144516 Malus domestica MDP0000144516 I 0.729
MDP0000135652 Malus domestica MDP0000135652 I 0.729
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.729
Pm019404 Prunus mume Pm019404 I 0.729
Cagra.0578s0054 Capsella grandiflora Cagra.0578s0054 I 0.729
Bostr.20505s0022 Boechera stricta Bostr.20505s0022 I 0.729
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.729
Bra017638 Brassica rapa Bra017638 I 0.729
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.729
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.729
MDP0000475549 Malus domestica MDP0000475549 I 0.729
Eucgr.B03514 Eucalyptus grandis Eucgr.B03514 I 0.729
Traes_2AL_8DF89AA72 Triticum aestivum Traes_2AL_8DF89AA72 I 0.729
Carubv10017951m.g Capsella rubella Carubv10017951m.g I 0.729
F775_05654 Aegilops tauschii F775_05654 I 0.729
MDP0000136650 Malus domestica MDP0000136650 I 0.729
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.729
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.729
GSMUA_Achr7G12610_001 Musa acuminata GSMUA_Achr7G12610_001 I 0.729
GLYMA08G06991 Glycine max GLYMA08G06991 I 0.729
Thhalv10026116m.g Eutrema salsugineum Thhalv10026116m.g I 0.729
Traes_2DL_6CD5A5CD9 Triticum aestivum Traes_2DL_6CD5A5CD9 I 0.729
LjSGA_021013.1 Lotus japonicus LjSGA_021013.1 I 0.729
chr6.CM0055.180.nc Lotus japonicus chr6.CM0055.180.nc I 0.729
PK08595.1 Cannabis sativa PK08595.1 I 0.729
MLOC_12133 Hordeum vulgare MLOC_12133 I 0.729
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.729
AGL16 Arabidopsis thaliana AT3G57230 D 0.729
Solyc01g106170.2 Solanum lycopersicum Solyc01g106170.2 I 0.729
TRIUR3_18402 Triticum urartu TRIUR3_18402 I 0.729
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.729
cassava4651.m1 Manihot esculenta cassava4651.m1 I 0.708
cassava21958.m1 Manihot esculenta cassava21958.m1 I 0.708
Traes_5AS_7BFB385EF Triticum aestivum Traes_5AS_7BFB385EF I 0.708
Cucsa.115490 Cucumis sativus Cucsa.115490 I 0.708
cassava45813.m1 Manihot esculenta cassava45813.m1 I 0.708
VIT_00s0211g00180 Vitis vinifera VIT_00s0211g00180 I 0.708
29804.m001536 Ricinus communis 29804.m001536 I 0.708
TRIUR3_28215 Triticum urartu TRIUR3_28215 I 0.708
cassava39185.m1 Manihot esculenta cassava39185.m1 I 0.708
AGL15 Arabidopsis thaliana AT5G13790 D 0.708
Ca_24925 Cicer arietinum Ca_24925 I 0.708
Pm016579 Prunus mume Pm016579 I 0.708
Pm004218 Prunus mume Pm004218 I 0.708
BGIOSGA004940 Oryza indica BGIOSGA004940 I 0.708
Cla017565 Citrullus lanatus Cla017565 I 0.708
VIT_00s0211g00150 Vitis vinifera VIT_00s0211g00150 I 0.708
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.708
Cla002388 Citrullus lanatus Cla002388 I 0.708
Traes_5DS_16243E52C Triticum aestivum Traes_5DS_16243E52C I 0.708
Pm021962 Prunus mume Pm021962 I 0.708
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.708
Bo2g162920 Brassica oleracea Bo2g162920 I 0.708
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.708
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.708
Pavir.Ab02921 Panicum virgatum Pavir.Ab02921 I 0.708
Pavir.Cb01898 Panicum virgatum Pavir.Cb01898 I 0.708
orange1.1g036452m.g Citrus sinensis orange1.1g036452m.g I 0.708
orange1.1g025240m.g Citrus sinensis orange1.1g025240m.g I 0.708
Lus10028214.g Linum usitatissimum Lus10028214.g I 0.708
Lus10042918.g Linum usitatissimum Lus10042918.g I 0.708
MDP0000228942 Malus domestica MDP0000228942 I 0.708
ANR1 Arabidopsis thaliana AT2G14210 I 0.708
Pavir.Ea01147 Panicum virgatum Pavir.Ea01147 I 0.708
SapurV1A.0383s0080 Salix purpurea SapurV1A.0383s0080 I 0.708
SapurV1A.2206s0010 Salix purpurea SapurV1A.2206s0010 I 0.708
PK01421.1 Cannabis sativa PK01421.1 I 0.708
SapurV1A.0068s0650 Salix purpurea SapurV1A.0068s0650 I 0.708
SapurV1A.0027s0860 Salix purpurea SapurV1A.0027s0860 I 0.708
Pavir.Fb01587 Panicum virgatum Pavir.Fb01587 I 0.708
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I 0.708
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I 0.708
Gorai.008G112400 Gossypium raimondii Gorai.008G112400 I 0.708
Gorai.008G018100 Gossypium raimondii Gorai.008G018100 I 0.708
Carubv10006544m.g Capsella rubella Carubv10006544m.g I 0.708
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.708
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.708
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.708
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.708
Cucsa.331900 Cucumis sativus Cucsa.331900 I 0.708
mgf021543m Mimulus guttatus mgf021543m I 0.708
Aquca_035_00266 Aquilegia coerulea Aquca_035_00266 I 0.708
Ciclev10032519m.g Citrus clementina Ciclev10032519m.g I 0.708
Eucgr.F02161 Eucalyptus grandis Eucgr.F02161 I 0.708
gene26429-v1.0-hybrid Fragaria vesca gene26429-v1.0-hybrid I 0.708
gene29503-v1.0-hybrid Fragaria vesca gene29503-v1.0-hybrid I 0.708
Gorai.004G169000 Gossypium raimondii Gorai.004G169000 I 0.708
gene25618-v1.0-hybrid Fragaria vesca gene25618-v1.0-hybrid I 0.708
gene13354-v1.0-hybrid Fragaria vesca gene13354-v1.0-hybrid I 0.708
Eucgr.G03284 Eucalyptus grandis Eucgr.G03284 I 0.708
evm.TU.supercontig_125.55 Carica papaya evm.TU.supercontig_125.55 I 0.708
Cucsa.248870 Cucumis sativus Cucsa.248870 I 0.708
Solyc12g088080.1 Solanum lycopersicum Solyc12g088080.1 I 0.708
OGLUM12G07150 Oryza glumaepatula OGLUM12G07150 I 0.708
OLONG_003033 Oryza longistaminata OLONG_003033 I 0.708
OLONG_004860 Oryza longistaminata OLONG_004860 I 0.708
OLONG_006914 Oryza longistaminata OLONG_006914 I 0.708
F775_30822 Aegilops tauschii F775_30822 I 0.708
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.708
OBART04G25610 Oryza barthii OBART04G25610 I 0.708
OBART12G05940 Oryza barthii OBART12G05940 I 0.708
OGLUM01G43970 Oryza glumaepatula OGLUM01G43970 I 0.708
OGLUM02G31980 Oryza glumaepatula OGLUM02G31980 I 0.708
F775_11207 Aegilops tauschii F775_11207 I 0.708
OMERI01G36640 Oryza meridionalis OMERI01G36640 I 0.708
ONIVA02G34790 Oryza nivara ONIVA02G34790 I 0.708
ONIVA12G05640 Oryza nivara ONIVA12G05640 I 0.708
OPUNC01G38480 Oryza punctata OPUNC01G38480 I 0.708
OPUNC02G29000 Oryza punctata OPUNC02G29000 I 0.708
ONIVA01G44610 Oryza nivara ONIVA01G44610 I 0.708
OMERI12G04040 Oryza meridionalis OMERI12G04040 I 0.708
OMERI02G30060 Oryza meridionalis OMERI02G30060 I 0.708
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.708
F775_08934 Aegilops tauschii F775_08934 I 0.708
OBART02G31280 Oryza barthii OBART02G31280 I 0.708
OBART01G39740 Oryza barthii OBART01G39740 I 0.708
GRMZM2G055782 Zea mays GRMZM2G055782 I 0.708
GRMZM2G160687 Zea mays GRMZM2G160687 I 0.708
GSMUA_Achr10G30040_001 Musa acuminata GSMUA_Achr10G30040_001 I 0.708
GSMUA_Achr3G07310_001 Musa acuminata GSMUA_Achr3G07310_001 I 0.708
GRMZM2G032905 Zea mays GRMZM2G032905 I 0.708
GLYMA15G06470 Glycine max GLYMA15G06470 I 0.708
GLYMA08G07001 Glycine max GLYMA08G07001 I 0.708
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.708
GLYMA13G32810 Glycine max GLYMA13G32810 I 0.708
GLYMA04G43640 Glycine max GLYMA04G43640 I 0.708
GSMUA_Achr5G24560_001 Musa acuminata GSMUA_Achr5G24560_001 I 0.708
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.708
OB02G38310 Oryza brachyantha OB02G38310 I 0.708
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.708
OB12G15620 Oryza brachyantha OB12G15620 I 0.708
MTR_2g009890 Medicago truncatula MTR_2g009890 I 0.708
MTR_0003s0590 Medicago truncatula MTR_0003s0590 I 0.708
GSMUA_Achr9G15540_001 Musa acuminata GSMUA_Achr9G15540_001 I 0.708
LPERR12G05240 Leersia perrieri LPERR12G05240 I 0.708
MLOC_57890 Hordeum vulgare MLOC_57890 I 0.708
OPUNC04G12890 Oryza punctata OPUNC04G12890 I 0.708
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.708
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.708
AMTR_s00109p00015260 Amborella trichopoda AMTR_s00109p00015260 I 0.708
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.708
Si003917m.g Setaria italica Si003917m.g I 0.708
Sb08g006460 Sorghum bicolor Sb08g006460 I 0.708
Sb04g028960 Sorghum bicolor Sb04g028960 I 0.708
PRUPE_ppa011140mg Prunus persica PRUPE_ppa011140mg I 0.708
PRUPE_ppa021434mg Prunus persica PRUPE_ppa021434mg I 0.708
PRUPE_ppa024736mg Prunus persica PRUPE_ppa024736mg I 0.708
Si007187m.g Setaria italica Si007187m.g I 0.708
Si012517m.g Setaria italica Si012517m.g I 0.708
TCM_024579 Theobroma cacao TCM_024579 I 0.708
Traes_1AS_3232D5589 Triticum aestivum Traes_1AS_3232D5589 I 0.708
Traes_1BS_7366111C01 Triticum aestivum Traes_1BS_7366111C01 I 0.708
Traes_1BS_7366111C0 Triticum aestivum Traes_1BS_7366111C0 I 0.708
TCM_005818 Theobroma cacao TCM_005818 I 0.708
Solyc07g055920.2 Solanum lycopersicum Solyc07g055920.2 I 0.708
Si019880m.g Setaria italica Si019880m.g I 0.708
Si022981m.g Setaria italica Si022981m.g I 0.708
Solyc02g091550.1 Solanum lycopersicum Solyc02g091550.1 I 0.708
POPTR_0013s09960 Populus trichocarpa POPTR_0013s09960 I 0.708
AGL15 Populus trichocarpa POPTR_0009s06060 I 0.708
Bra035907 Brassica rapa Bra035907 I 0.708
ORGLA12G0056500 Oryza glaberrima ORGLA12G0056500 I 0.708
ORUFI01G43090 Oryza rufipogon ORUFI01G43090 I 0.708
ORUFI02G32980 Oryza rufipogon ORUFI02G32980 I 0.708
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.708
ORGLA02G0267800 Oryza glaberrima ORGLA02G0267800 I 0.708
BRADI4G40350 Brachypodium distachyon BRADI4G40350 I 0.708
OPUNC12G05660 Oryza punctata OPUNC12G05660 I 0.708
ORGLA01G0336500 Oryza glaberrima ORGLA01G0336500 I 0.708
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.708
Bra029281 Brassica rapa Bra029281 I 0.708
PGSC0003DMG400017295 Solanum tuberosum PGSC0003DMG400017295 I 0.708
POPTR_0001s29100 Populus trichocarpa POPTR_0001s29100 I 0.708
POPTR_0003s16840 Populus trichocarpa POPTR_0003s16840 I 0.708
POPTR_0003s16870 Populus trichocarpa POPTR_0003s16870 I 0.708
MADS13 Oryza sativa OS12G0207000 I 0.708
MADS31 Oryza sativa OS04G0614100 I 0.708
ORUFI12G06810 Oryza rufipogon ORUFI12G06810 I 0.708
MADS21 Oryza sativa OS01G0886200 I 0.708
MADS57 Oryza sativa OS02G0731200 I 0.708
Traes_1DS_F70AAB507 Triticum aestivum Traes_1DS_F70AAB507 I 0.708