Traes_7BL_F5B6736D0 (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_7BL_F5B6736D0 T256611_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9FVN1_MAIZE
M10982_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_03
0.750 0.750
AGL16
M06987_2.00
Arabidopsis thaliana
TWCCHAAWDDGGWAA

TTWCCHHWTTDGGWA
Dap-seq
OMalley et al.(2016)
AGL16_col_a
0.708 0.708
AGL16
M06988_2.00
Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS

STTTCCHWWTWDGGWAANWHW
Dap-seq
OMalley et al.(2016)
AGL16_colamp_a
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7BL_F5B6736D0.1 MADS box 10 57

Links

Other MADS box family TFs
Other Triticum aestivum TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_4AL_72A03AD23 Triticum aestivum Traes_4AL_72A03AD23 I 0.958
Traes_1AS_24511D656 Triticum aestivum Traes_1AS_24511D656 I 0.812
Traes_1BS_7366111C0 Triticum aestivum Traes_1BS_7366111C0 I 0.812
Traes_1BS_7366111C01 Triticum aestivum Traes_1BS_7366111C01 I 0.812
Traes_1DS_A0312C264 Triticum aestivum Traes_1DS_A0312C264 I 0.812
F775_18161 Aegilops tauschii F775_18161 I 0.812
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.792
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.792
OBART06G14060 Oryza barthii OBART06G14060 I 0.792
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.792
F775_20565 Aegilops tauschii F775_20565 I 0.792
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.792
Traes_1AS_3232D5589 Triticum aestivum Traes_1AS_3232D5589 I 0.792
Traes_1DS_F70AAB507 Triticum aestivum Traes_1DS_F70AAB507 I 0.792
F775_08934 Aegilops tauschii F775_08934 I 0.792
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.792
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.792
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.792
OS06G0347700 Oryza sativa OS06G0347700 I 0.792
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.792
TRIUR3_19891 Triticum urartu TRIUR3_19891 I 0.771
Traes_2DL_662837152 Triticum aestivum Traes_2DL_662837152 I 0.771
F775_27066 Aegilops tauschii F775_27066 I 0.771
LPERR04G11770 Leersia perrieri LPERR04G11770 I 0.771
Traes_2BL_3E613DE21 Triticum aestivum Traes_2BL_3E613DE21 I 0.771
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.771
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.771
OB06G22200 Oryza brachyantha OB06G22200 I 0.771
Traes_2AL_267502097 Triticum aestivum Traes_2AL_267502097 I 0.771
BRADI5G12440 Brachypodium distachyon BRADI5G12440 I 0.771
AGL72 Arabidopsis thaliana AT5G51860 I 0.750
OLONG_016283 Oryza longistaminata OLONG_016283 I 0.750
AMTR_s00109p00015260 Amborella trichopoda AMTR_s00109p00015260 I 0.750
OGLUM02G22050 Oryza glumaepatula OGLUM02G22050 I 0.750
OS04G0461300 Oryza sativa OS04G0461300 I 0.750
OBART02G21870 Oryza barthii OBART02G21870 I 0.750
OBART04G15020 Oryza barthii OBART04G15020 I 0.750
OLONG_024179 Oryza longistaminata OLONG_024179 I 0.750
ONIVA02G24100 Oryza nivara ONIVA02G24100 I 0.750
ORUFI02G22950 Oryza rufipogon ORUFI02G22950 I 0.750
BGIOSGA008494 Oryza indica BGIOSGA008494 I 0.750
Sb04g024010 Sorghum bicolor Sb04g024010 I 0.750
ORUFI04G16410 Oryza rufipogon ORUFI04G16410 I 0.750
MADS27 Oryza sativa OS02G0579600 I 0.750
Q9FVN1_MAIZE Zea mays Q9FVN1_MAIZE D 0.750
ORGLA04G0120000 Oryza glaberrima ORGLA04G0120000 I 0.750
Sb06g019040 Sorghum bicolor Sb06g019040 I 0.750
OB02G29310 Oryza brachyantha OB02G29310 I 0.750
Si019337m.g Setaria italica Si019337m.g I 0.750
ONIVA04G13150 Oryza nivara ONIVA04G13150 I 0.750
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.750
OPUNC04G12890 Oryza punctata OPUNC04G12890 I 0.750
OPUNC02G19600 Oryza punctata OPUNC02G19600 I 0.750
OMERI02G21410 Oryza meridionalis OMERI02G21410 I 0.750
OB04G22330 Oryza brachyantha OB04G22330 I 0.750
LPERR02G17700 Leersia perrieri LPERR02G17700 I 0.750
GRMZM2G316366 Zea mays GRMZM2G316366 I 0.750
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.750
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.750
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.750
GRMZM2G055782 Zea mays GRMZM2G055782 I 0.750
LPERR08G12860 Leersia perrieri LPERR08G12860 I 0.750
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.750
BRADI3G46920 Brachypodium distachyon BRADI3G46920 I 0.750
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.750
MDP0000783966 Malus domestica MDP0000783966 I 0.729
Pavir.Aa01540 Panicum virgatum Pavir.Aa01540 I 0.729
Bra028283 Brassica rapa Bra028283 I 0.729
Pavir.Ab02921 Panicum virgatum Pavir.Ab02921 I 0.729
Sb06g028420 Sorghum bicolor Sb06g028420 I 0.729
Sb04g028960 Sorghum bicolor Sb04g028960 I 0.729
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.729
LjSGA_021013.1 Lotus japonicus LjSGA_021013.1 I 0.729
PRUPE_ppa024736mg Prunus persica PRUPE_ppa024736mg I 0.729
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.729
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I 0.729
Si012517m.g Setaria italica Si012517m.g I 0.729
Pavir.Ga00461 Panicum virgatum Pavir.Ga00461 I 0.729
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I 0.729
Pavir.Fb01587 Panicum virgatum Pavir.Fb01587 I 0.729
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.729
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.729
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.729
Bostr.15774s0333 Boechera stricta Bostr.15774s0333 I 0.729
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.729
mgf025830m Mimulus guttatus mgf025830m I 0.729
Pm021962 Prunus mume Pm021962 I 0.729
mgf021543m Mimulus guttatus mgf021543m I 0.729
Cla023427 Citrullus lanatus Cla023427 I 0.729
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.729
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.729
Solyc01g106170.2 Solanum lycopersicum Solyc01g106170.2 I 0.729
Si019880m.g Setaria italica Si019880m.g I 0.729
gene25618-v1.0-hybrid Fragaria vesca gene25618-v1.0-hybrid I 0.729
mgf019667m Mimulus guttatus mgf019667m I 0.729
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.729
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.729
ANR1 Arabidopsis thaliana AT2G14210 I 0.729
MDP0000228942 Malus domestica MDP0000228942 I 0.729
Sb07g021110 Sorghum bicolor Sb07g021110 I 0.729
GRMZM2G135018 Zea mays GRMZM2G135018 I 0.729
OMERI08G12880 Oryza meridionalis OMERI08G12880 I 0.729
GRMZM2G044408 Zea mays GRMZM2G044408 I 0.729
GRMZM2G032905 Zea mays GRMZM2G032905 I 0.729
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I 0.729
Bo1g007520 Brassica oleracea Bo1g007520 I 0.729
F775_15097 Aegilops tauschii F775_15097 I 0.729
Bra011509 Brassica rapa Bra011509 I 0.729
GSMUA_Achr3G07310_001 Musa acuminata GSMUA_Achr3G07310_001 I 0.729
OGLUM04G14880 Oryza glumaepatula OGLUM04G14880 I 0.729
GRMZM2G005155 Zea mays GRMZM2G005155 I 0.729
AGL71 Arabidopsis thaliana AT5G51870 I 0.729
Bra029155 Brassica rapa Bra029155 I 0.729
gene22696-v1.0-hybrid Fragaria vesca gene22696-v1.0-hybrid I 0.723
PK27158.1 Cannabis sativa PK27158.1 I 0.714
gene26429-v1.0-hybrid Fragaria vesca gene26429-v1.0-hybrid I 0.708
GRMZM2G052045 Zea mays GRMZM2G052045 I 0.708
MDP0000156783 Malus domestica MDP0000156783 I 0.708
MDP0000136650 Malus domestica MDP0000136650 I 0.708
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I 0.708
GRMZM2G128953 Zea mays GRMZM2G128953 I 0.708
GSMUA_Achr3G20280_001 Musa acuminata GSMUA_Achr3G20280_001 I 0.708
Bostr.20505s0022 Boechera stricta Bostr.20505s0022 I 0.708
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.708
LPERR02G25570 Leersia perrieri LPERR02G25570 I 0.708
Cagra.0578s0054 Capsella grandiflora Cagra.0578s0054 I 0.708
Cagra.4003s0006 Capsella grandiflora Cagra.4003s0006 I 0.708
Carubv10027142m.g Capsella rubella Carubv10027142m.g I 0.708
Carubv10017951m.g Capsella rubella Carubv10017951m.g I 0.708
GSMUA_Achr10G30040_001 Musa acuminata GSMUA_Achr10G30040_001 I 0.708
Eucgr.G03284 Eucalyptus grandis Eucgr.G03284 I 0.708
orange1.1g037016m.g Citrus sinensis orange1.1g037016m.g I 0.708
F775_05654 Aegilops tauschii F775_05654 I 0.708
Thhalv10004954m.g Eutrema salsugineum Thhalv10004954m.g I 0.708
SapurV1A.2345s0030 Salix purpurea SapurV1A.2345s0030 I 0.708
SapurV1A.1370s0060 Salix purpurea SapurV1A.1370s0060 I 0.708
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.708
BRADI3G00730 Brachypodium distachyon BRADI3G00730 I 0.708
chr6.CM0055.180.nc Lotus japonicus chr6.CM0055.180.nc I 0.708
PK27820.1 Cannabis sativa PK27820.1 I 0.708
Thhalv10026116m.g Eutrema salsugineum Thhalv10026116m.g I 0.708
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I 0.708
Bra028282 Brassica rapa Bra028282 I 0.708
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.708
MDP0000475549 Malus domestica MDP0000475549 I 0.708
MDP0000254052 Malus domestica MDP0000254052 I 0.708
Pavir.Aa00445 Panicum virgatum Pavir.Aa00445 I 0.708
GLYMA14G36221 Glycine max GLYMA14G36221 I 0.708
Pavir.Gb00526 Panicum virgatum Pavir.Gb00526 I 0.708
Bra017638 Brassica rapa Bra017638 I 0.708
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.708
MDP0000234911 Malus domestica MDP0000234911 I 0.708
mgf023192m Mimulus guttatus mgf023192m I 0.708
TCM_000931 Theobroma cacao TCM_000931 I 0.708
AGL16 Arabidopsis thaliana AT3G57230 D 0.708
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.708
Solyc02g091550.1 Solanum lycopersicum Solyc02g091550.1 I 0.708
OMERI02G30060 Oryza meridionalis OMERI02G30060 I 0.708
OLONG_011763 Oryza longistaminata OLONG_011763 I 0.708
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.708
Traes_2AL_8DF89AA72 Triticum aestivum Traes_2AL_8DF89AA72 I 0.708
OGLUM08G16360 Oryza glumaepatula OGLUM08G16360 I 0.708
AMTR_s00046p00208680 Amborella trichopoda AMTR_s00046p00208680 I 0.708
OLONG_004860 Oryza longistaminata OLONG_004860 I 0.708
Bo00946s010 Brassica oleracea Bo00946s010 I 0.708
Si014885m.g Setaria italica Si014885m.g I 0.708
ORUFI02G32980 Oryza rufipogon ORUFI02G32980 I 0.708
MADS57 Oryza sativa OS02G0731200 I 0.708
PGSC0003DMG400023729 Solanum tuberosum PGSC0003DMG400023729 I 0.708
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.708
ORGLA02G0267800 Oryza glaberrima ORGLA02G0267800 I 0.708
OPUNC08G13690 Oryza punctata OPUNC08G13690 I 0.708
ONIVA02G34790 Oryza nivara ONIVA02G34790 I 0.708
BGIOSGA026939 Oryza indica BGIOSGA026939 I 0.708
ONIVA08G16700 Oryza nivara ONIVA08G16700 I 0.708
OPUNC02G29000 Oryza punctata OPUNC02G29000 I 0.708
Bo7g116760 Brassica oleracea Bo7g116760 I 0.708
Traes_2DL_6CD5A5CD9 Triticum aestivum Traes_2DL_6CD5A5CD9 I 0.708
cassava33801.m1 Manihot esculenta cassava33801.m1 I 0.708
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.708
OB02G38310 Oryza brachyantha OB02G38310 I 0.708
OB04G32080 Oryza brachyantha OB04G32080 I 0.708
Cucsa.194800 Cucumis sativus Cucsa.194800 I 0.708
Cucsa.331900 Cucumis sativus Cucsa.331900 I 0.708
MLOC_12133 Hordeum vulgare MLOC_12133 I 0.708
AC233912.1_FG001 Zea mays AC233912.1_FG001 I 0.708
MTR_4g093030 Medicago truncatula MTR_4g093030 I 0.708
MTR_5g066180 Medicago truncatula MTR_5g066180 I 0.708
Cla006973 Citrullus lanatus Cla006973 I 0.708
Ca_19854 Cicer arietinum Ca_19854 I 0.708
VIT_00s0211g00150 Vitis vinifera VIT_00s0211g00150 I 0.708
Bo9g103660 Brassica oleracea Bo9g103660 I 0.708
TRIUR3_18402 Triticum urartu TRIUR3_18402 I 0.708
OGLUM02G31980 Oryza glumaepatula OGLUM02G31980 I 0.708
VIT_00s0211g00180 Vitis vinifera VIT_00s0211g00180 I 0.708
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I 0.708
Ca_14956 Cicer arietinum Ca_14956 I 0.708
OB08G23110 Oryza brachyantha OB08G23110 I 0.708
OBART02G31280 Oryza barthii OBART02G31280 I 0.708
AGL18 Vitis vinifera VIT_08s0007g08790 I 0.708
Aquca_009_00337 Aquilegia coerulea Aquca_009_00337 I 0.708