Traes_7BS_9D42F9BEA (Triticum aestivum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Traes_7BS_9D42F9BEA T256615_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL16
M06987_2.00
Arabidopsis thaliana
TWCCHAAWDDGGWAA

TTWCCHHWTTDGGWA
Dap-seq
OMalley et al.(2016)
AGL16_col_a
0.759 0.759
AGL16
M06988_2.00
Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS

STTTCCHWWTWDGGWAANWHW
Dap-seq
OMalley et al.(2016)
AGL16_colamp_a
0.759 0.759
A1YJE4_HORVD
M10900_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM10_01
0.724 0.724
MAD55_ORYSJ
M10962_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS55_01
0.724 0.724
Q4U0F1_WHEAT
M10978_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT2_01
0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_7BS_9D42F9BEA.2 MADS box 1 29

Links

Other MADS box family TFs
Other Triticum aestivum TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_7DS_59CBF5647 Triticum aestivum Traes_7DS_59CBF5647 I 1.000
F775_25533 Aegilops tauschii F775_25533 I 1.000
Traes_7DS_D9008CC09 Triticum aestivum Traes_7DS_D9008CC09 I 1.000
TRIUR3_09267 Triticum urartu TRIUR3_09267 I 1.000
MLOC_4407 Hordeum vulgare MLOC_4407 I 1.000
TRIUR3_17292 Triticum urartu TRIUR3_17292 I 1.000
Traes_7BS_DC9822CEF Triticum aestivum Traes_7BS_DC9822CEF I 1.000
Traes_7DS_05F0F0B64 Triticum aestivum Traes_7DS_05F0F0B64 I 1.000
Traes_5AS_029A65B0A Triticum aestivum Traes_5AS_029A65B0A I 1.000
Traes_5DS_3EBE121C7 Triticum aestivum Traes_5DS_3EBE121C7 I 1.000
Traes_7AS_360247894 Triticum aestivum Traes_7AS_360247894 I 1.000
Traes_7AS_376CD50EA Triticum aestivum Traes_7AS_376CD50EA I 1.000
Traes_7AS_8123257BA Triticum aestivum Traes_7AS_8123257BA I 0.966
TRIUR3_09108 Triticum urartu TRIUR3_09108 I 0.966
Traes_5DS_B288EE729 Triticum aestivum Traes_5DS_B288EE729 I 0.897
LPERR04G04720 Leersia perrieri LPERR04G04720 I 0.862
Si003917m.g Setaria italica Si003917m.g I 0.862
OB04G15510 Oryza brachyantha OB04G15510 I 0.862
OPUNC04G05760 Oryza punctata OPUNC04G05760 I 0.862
mgf021543m Mimulus guttatus mgf021543m I 0.828
Pavir.Fb01587 Panicum virgatum Pavir.Fb01587 I 0.828
Pavir.Ea01057 Panicum virgatum Pavir.Ea01057 I 0.828
OLONG_011763 Oryza longistaminata OLONG_011763 I 0.793
OMERI01G36640 Oryza meridionalis OMERI01G36640 I 0.793
OMERI08G12880 Oryza meridionalis OMERI08G12880 I 0.793
ONIVA01G44610 Oryza nivara ONIVA01G44610 I 0.793
OLONG_003033 Oryza longistaminata OLONG_003033 I 0.793
OGLUM01G43970 Oryza glumaepatula OGLUM01G43970 I 0.793
OBART01G39740 Oryza barthii OBART01G39740 I 0.793
Pavir.Cb00838 Panicum virgatum Pavir.Cb00838 I 0.793
OBART08G15610 Oryza barthii OBART08G15610 I 0.793
ONIVA08G16700 Oryza nivara ONIVA08G16700 I 0.793
OB08G23110 Oryza brachyantha OB08G23110 I 0.793
Bo8g091790 Brassica oleracea Bo8g091790 I 0.793
BGIOSGA026939 Oryza indica BGIOSGA026939 I 0.793
BGIOSGA004940 Oryza indica BGIOSGA004940 I 0.793
Sb07g021110 Sorghum bicolor Sb07g021110 I 0.793
Si014885m.g Setaria italica Si014885m.g I 0.793
MADS21 Oryza sativa OS01G0886200 I 0.793
ORUFI01G43090 Oryza rufipogon ORUFI01G43090 I 0.793
Bra007324 Brassica rapa Bra007324 I 0.793
OPUNC08G13690 Oryza punctata OPUNC08G13690 I 0.793
ORGLA01G0336500 Oryza glaberrima ORGLA01G0336500 I 0.793
ORGLA08G0137000 Oryza glaberrima ORGLA08G0137000 I 0.793
OPUNC01G38480 Oryza punctata OPUNC01G38480 I 0.793
OGLUM08G16360 Oryza glumaepatula OGLUM08G16360 I 0.793
GSMUA_Achr10G30040_001 Musa acuminata GSMUA_Achr10G30040_001 I 0.793
Lus10015766.g Linum usitatissimum Lus10015766.g I 0.793
GRMZM2G137510 Zea mays GRMZM2G137510 I 0.759
GLYMA05G28130 Glycine max GLYMA05G28130 I 0.759
Lus10042918.g Linum usitatissimum Lus10042918.g I 0.759
Eucgr.H04618 Eucalyptus grandis Eucgr.H04618 I 0.759
Lus10037039.g Linum usitatissimum Lus10037039.g I 0.759
GRMZM2G052045 Zea mays GRMZM2G052045 I 0.759
GRMZM2G044408 Zea mays GRMZM2G044408 I 0.759
MADS23 Oryza sativa OS08G0431900 I 0.759
VIT_14s0068g01800 Vitis vinifera VIT_14s0068g01800 I 0.759
Gorai.008G092300 Gossypium raimondii Gorai.008G092300 I 0.759
Bra014628 Brassica rapa Bra014628 I 0.759
BRADI3G57017 Brachypodium distachyon BRADI3G57017 I 0.759
Bra019018 Brassica rapa Bra019018 N 0.759
Thhalv10026116m.g Eutrema salsugineum Thhalv10026116m.g I 0.759
Bra003278 Brassica rapa Bra003278 I 0.759
LPERR08G12860 Leersia perrieri LPERR08G12860 I 0.759
GLYMA08G07001 Glycine max GLYMA08G07001 I 0.759
GSMUA_Achr9G15540_001 Musa acuminata GSMUA_Achr9G15540_001 I 0.759
MDP0000475549 Malus domestica MDP0000475549 I 0.759
AMTR_s00109p00015260 Amborella trichopoda AMTR_s00109p00015260 I 0.759
Bo4g111230 Brassica oleracea Bo4g111230 I 0.759
Bo7g116760 Brassica oleracea Bo7g116760 I 0.759
Bo6g072840 Brassica oleracea Bo6g072840 I 0.759
Bra017638 Brassica rapa Bra017638 I 0.759
MDP0000228942 Malus domestica MDP0000228942 I 0.724
TRIUR3_03219 Triticum urartu TRIUR3_03219 I 0.724
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I 0.724
Traes_6AL_A93C6F2FC Triticum aestivum Traes_6AL_A93C6F2FC I 0.724
PK11571.1 Cannabis sativa PK11571.1 I 0.724
Solyc02g091550.1 Solanum lycopersicum Solyc02g091550.1 I 0.724
Traes_6DL_D8C9E421C Triticum aestivum Traes_6DL_D8C9E421C I 0.724
Pavir.J13837 Panicum virgatum Pavir.J13837 I 0.724
MDP0000268317 Malus domestica MDP0000268317 I 0.724
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I 0.724
Pavir.Ab02921 Panicum virgatum Pavir.Ab02921 I 0.724
VIT_00s0211g00180 Vitis vinifera VIT_00s0211g00180 I 0.724
Carubv10006544m.g Capsella rubella Carubv10006544m.g I 0.724
Cucsa.331900 Cucumis sativus Cucsa.331900 I 0.724
Carubv10017886m.g Capsella rubella Carubv10017886m.g I 0.724
estExt_fgenesh1_kg.C_260002 Physcomitrella patens estExt_fgenesh1_kg.C_260002 I 0.724
Cagra.0578s0070 Capsella grandiflora Cagra.0578s0070 I 0.724
mgf022278m Mimulus guttatus mgf022278m I 0.724
Bostr.25542s0226 Boechera stricta Bostr.25542s0226 I 0.724
Solyc01g106170.2 Solanum lycopersicum Solyc01g106170.2 I 0.724
Eucgr.F02141 Eucalyptus grandis Eucgr.F02141 I 0.724
cassava4651.m1 Manihot esculenta cassava4651.m1 I 0.724
Aquca_010_00060 Aquilegia coerulea Aquca_010_00060 I 0.724
VIT_00s0211g00150 Vitis vinifera VIT_00s0211g00150 I 0.724
TRIUR3_09266 Triticum urartu TRIUR3_09266 I 0.724
Lus10028214.g Linum usitatissimum Lus10028214.g I 0.724
Ca_14956 Cicer arietinum Ca_14956 I 0.724
gene25618-v1.0-hybrid Fragaria vesca gene25618-v1.0-hybrid I 0.724
cassava39185.m1 Manihot esculenta cassava39185.m1 I 0.724
Pm021962 Prunus mume Pm021962 I 0.724
Pavir.Da01333 Panicum virgatum Pavir.Da01333 I 0.724
ORGLA06G0069900 Oryza glaberrima ORGLA06G0069900 I 0.724
GRMZM2G046885 Zea mays GRMZM2G046885 I 0.724
GRMZM2G370777 Zea mays GRMZM2G370777 I 0.724
GRMZM2G032905 Zea mays GRMZM2G032905 I 0.724
GLYMA15G06470 Glycine max GLYMA15G06470 I 0.724
GLYMA13G32810 Glycine max GLYMA13G32810 I 0.724
GRMZM5G814279 Zea mays GRMZM5G814279 I 0.724
GSMUA_Achr10G19290_001 Musa acuminata GSMUA_Achr10G19290_001 I 0.724
GSMUA_Achr3G07310_001 Musa acuminata GSMUA_Achr3G07310_001 I 0.724
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I 0.724
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I 0.724
GSMUA_Achr2G06250_001 Musa acuminata GSMUA_Achr2G06250_001 I 0.724
GSMUA_Achr10G21480_001 Musa acuminata GSMUA_Achr10G21480_001 I 0.724
GLYMA08G11110 Glycine max GLYMA08G11110 I 0.724
AGL17 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4000157 I 0.724
BGIOSGA008983 Oryza indica BGIOSGA008983 I 0.724
BGIOSGA021662 Oryza indica BGIOSGA021662 I 0.724
AGL18 Arabidopsis thaliana AT3G57390 I 0.724
AMTR_s00046p00208680 Amborella trichopoda AMTR_s00046p00208680 I 0.724
AMTR_s00013p00114420 Amborella trichopoda AMTR_s00013p00114420 I 0.724
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.724
Bo1g007520 Brassica oleracea Bo1g007520 I 0.724
Bra030228 Brassica rapa Bra030228 I 0.724
BRADI1G45807 Brachypodium distachyon BRADI1G45807 I 0.724
Bra011509 Brassica rapa Bra011509 I 0.724
Bra000392 Brassica rapa Bra000392 I 0.724
Bo4g149800 Brassica oleracea Bo4g149800 I 0.724
LPERR01G34270 Leersia perrieri LPERR01G34270 I 0.724
MAD55_ORYSJ Oryza sativa MAD55_ORYSJ D 0.724
PRUPE_ppa024736mg Prunus persica PRUPE_ppa024736mg I 0.724
Q4U0F1_WHEAT Triticum aestivum Q4U0F1_WHEAT D 0.724
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I 0.724
OS06G0347700 Oryza sativa OS06G0347700 I 0.724
OS06G0217300 Oryza sativa OS06G0217300 I 0.724
Sb04g028960 Sorghum bicolor Sb04g028960 I 0.724
Sb04g033930 Sorghum bicolor Sb04g033930 I 0.724
Si017524m.g Setaria italica Si017524m.g I 0.724
Si019880m.g Setaria italica Si019880m.g I 0.724
Si015525m.g Setaria italica Si015525m.g I 0.724
Si012517m.g Setaria italica Si012517m.g I 0.724
Si007641m.g Setaria italica Si007641m.g I 0.724
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.724
ORGLA12G0056500 Oryza glaberrima ORGLA12G0056500 I 0.724
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.724
OMERI06G08590 Oryza meridionalis OMERI06G08590 I 0.724
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.724
OBART06G14060 Oryza barthii OBART06G14060 I 0.724
OB06G16920 Oryza brachyantha OB06G16920 I 0.724
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.724
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.724
A1YJE4_HORVD Hordeum vulgare A1YJE4_HORVD D 0.724
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.724
ORGLA02G0288600 Oryza glaberrima ORGLA02G0288600 I 0.724
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.724
OPUNC06G07080 Oryza punctata OPUNC06G07080 I 0.724
Si025315m.g Setaria italica Si025315m.g I 0.724