RLM1 (Saccharomyces cerevisiae)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 YPL089C T256842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN

NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
(Direct) (Direct)
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG

CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA

TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.917 0.917
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN

NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.917 0.917
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
YPL089C MADS box 10 57

Links

Other MADS box family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action