Cla010744 (Citrullus lanatus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cla010744 T256960_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla010744 MADS box 14 61

Links

Other MADS box family TFs
Other Citrullus lanatus TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27866.m000233 Ricinus communis 27866.m000233 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.729
30099.m001672 Ricinus communis 30099.m001672 N 0.729
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Bra026764 Brassica rapa Bra026764 N 0.729
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.708
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
Ca_04658 Cicer arietinum Ca_04658 N 0.750
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Ca_18845 Cicer arietinum Ca_18845 N 0.708
Ca_26354 Cicer arietinum Ca_26354 N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.729
Ciclev10030327m.g Citrus clementina Ciclev10030327m.g N 0.750
Ciclev10032637m.g Citrus clementina Ciclev10032637m.g N 0.729
Cla006571 Citrullus lanatus Cla006571 N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.979
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.729
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.750
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.708
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.729
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.750
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.729
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.750
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.708
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.supercontig_20.85 Carica papaya evm.TU.supercontig_20.85 N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.729
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.750
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.708
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.708
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.750
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.729
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.729
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.708
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.750
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.750
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.729
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.708
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.729
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.729
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
gene00615-v1.0-hybrid Fragaria vesca gene00615-v1.0-hybrid N 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
gene15090-v1.0-hybrid Fragaria vesca gene15090-v1.0-hybrid N 0.750
GLYMA17G01771 Glycine max GLYMA17G01771 N 0.792
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
GLYMA20G27361 Glycine max GLYMA20G27361 N 0.771
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.708
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708
MDP0000237091 Malus domestica MDP0000237091 I 0.771
MDP0000434703 Malus domestica MDP0000434703 I 0.708
mgf017842m Mimulus guttatus mgf017842m N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
mgf020533m Mimulus guttatus mgf020533m N 0.708
mgf021403m Mimulus guttatus mgf021403m N 0.729
mgf022147m Mimulus guttatus mgf022147m N 0.708
mgf022403m Mimulus guttatus mgf022403m N 0.708
mgf023207m Mimulus guttatus mgf023207m N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
mgf024490m Mimulus guttatus mgf024490m N 0.708
mgf025566m Mimulus guttatus mgf025566m N 0.708
MTR_4g036915 Medicago truncatula MTR_4g036915 I 0.708
MTR_4g127140 Medicago truncatula MTR_4g127140 N 0.729
MTR_7g028448 Medicago truncatula MTR_7g028448 I 0.708
orange1.1g045249m.g Citrus sinensis orange1.1g045249m.g N 0.750
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.708
Pm017638 Prunus mume Pm017638 I 0.729
Pm021018 Prunus mume Pm021018 N 0.750
Pm021070 Prunus mume Pm021070 N 0.708
Pm021071 Prunus mume Pm021071 N 0.729
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.729
POPTR_0017s06710 Populus trichocarpa POPTR_0017s06710 N 0.708
POPTR_0017s06800 Populus trichocarpa POPTR_0017s06800 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
PRUPE_ppa024464mg Prunus persica PRUPE_ppa024464mg I 0.729
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.750
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.729
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.750
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.729
TCM_006323 Theobroma cacao TCM_006323 N 0.729
TCM_006325 Theobroma cacao TCM_006325 N 0.750
TCM_040735 Theobroma cacao TCM_040735 N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.737
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.708
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.729
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.729
VIT_07s0005g06590 Vitis vinifera VIT_07s0005g06590 N 0.729
VIT_10s0003g03970 Vitis vinifera VIT_10s0003g03970 N 0.750