CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm013170
(
Prunus mume
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Pm013170
T257052_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm013170
MADS box
141
188
KVEEKNKRHVTFSKRKRGLFNKAAELSVLCGAETAGIVVSSNGKVFCF
Links
Other
MADS box
family TFs
Other
Prunus mume
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000315688
Malus domestica
MDP0000315688
N
0.896
MDP0000291070
Malus domestica
MDP0000291070
N
0.875
Pm013201
Prunus mume
Pm013201
N
0.854
MDP0000611204
Malus domestica
MDP0000611204
N
0.854
PRUPE_ppa024282mg
Prunus persica
PRUPE_ppa024282mg
N
0.833
gene05451-v1.0-hybrid
Fragaria vesca
gene05451-v1.0-hybrid
N
0.750