CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28830.m000229
(
Ricinus communis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
28830.m000229
T257134_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28830.m000229
MADS box
10
57
LIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTF
Links
Other
MADS box
family TFs
Other
Ricinus communis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm002317
Prunus mume
Pm002317
N
0.750
TCM_000878
Theobroma cacao
TCM_000878
N
0.750
PRUPE_ppb022733mg
Prunus persica
PRUPE_ppb022733mg
N
0.750
GRMZM2G459864
Zea mays
GRMZM2G459864
N
0.729
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.708
VIT_00s0386g00010
Vitis vinifera
VIT_00s0386g00010
N
0.708