29693.m002041 (Ricinus communis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 29693.m002041 T257143_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29693.m002041 MADS box 20 67

Links

Other MADS box family TFs
Other Ricinus communis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.896
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.875
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.875
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.854
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.854
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.854
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.833
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.833
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.833
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.833
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.833
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.833
Cla009921 Citrullus lanatus Cla009921 N 0.833
29693.m002042 Ricinus communis 29693.m002042 N 0.833
cassava46357.m1 Manihot esculenta cassava46357.m1 N 0.812
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.812
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.792
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.792
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.792
orange1.1g038327m.g Citrus sinensis orange1.1g038327m.g N 0.778
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.771
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.771
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.771
Pm008734 Prunus mume Pm008734 N 0.771
SapurV1A.1613s0060 Salix purpurea SapurV1A.1613s0060 N 0.771
Ciclev10006405m.g Citrus clementina Ciclev10006405m.g N 0.750
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.750
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.750
Eucgr.E02870 Eucalyptus grandis Eucgr.E02870 N 0.750
orange1.1g039494m.g Citrus sinensis orange1.1g039494m.g N 0.750
Ciclev10006588m.g Citrus clementina Ciclev10006588m.g N 0.744
orange1.1g043113m.g Citrus sinensis orange1.1g043113m.g N 0.735
Ciclev10006740m.g Citrus clementina Ciclev10006740m.g N 0.729
Lus10025872.g Linum usitatissimum Lus10025872.g N 0.729
Lus10028473.g Linum usitatissimum Lus10028473.g N 0.729
Lus10028490.g Linum usitatissimum Lus10028490.g N 0.729
Gorai.009G284300 Gossypium raimondii Gorai.009G284300 N 0.729
Ciclev10006803m.g Citrus clementina Ciclev10006803m.g N 0.729
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.729
orange1.1g047467m.g Citrus sinensis orange1.1g047467m.g N 0.729
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 0.729
Ciclev10006546m.g Citrus clementina Ciclev10006546m.g N 0.725
Ciclev10006427m.g Citrus clementina Ciclev10006427m.g N 0.711
Eucgr.E02827 Eucalyptus grandis Eucgr.E02827 N 0.708
Eucgr.E02824 Eucalyptus grandis Eucgr.E02824 N 0.708
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.708
Eucgr.E02829 Eucalyptus grandis Eucgr.E02829 N 0.708
Eucgr.E02872 Eucalyptus grandis Eucgr.E02872 N 0.708
Gorai.010G132900 Gossypium raimondii Gorai.010G132900 N 0.708
Eucgr.L01236 Eucalyptus grandis Eucgr.L01236 N 0.708
Gorai.010G133300 Gossypium raimondii Gorai.010G133300 N 0.708