cassava19828.m1 (Manihot esculenta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 cassava19828.m1 T257185_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL80
M06994_2.00
Arabidopsis thaliana
TCACCA

TGGTGA
Dap-seq
OMalley et al.(2016)
FEM111_col_a
0.854 0.854
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19828.m1 MADS box 10 58

Links

Other MADS box family TFs
Other Manihot esculenta TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R006195 Calypte anna Aan_R006195 I 0.000
Afo_R011286 Aptenodytes forsteri Afo_R011286 I 0.000
Alligator_sinensis_CCG021131.1 Alligator sinensis Alligator_sinensis_CCG021131.1 I 0.000
ENSACAG00000017951 Anolis carolinensis ENSACAG00000017951 I 0.000
ENSAMEG00000006061 Ailuropoda melanoleuca ENSAMEG00000006061 I 0.000
ENSAMEG00000006086 Ailuropoda melanoleuca ENSAMEG00000006086 I 0.000
ENSAMXG00000000480 Astyanax mexicanus ENSAMXG00000000480 I 0.000
ENSAMXG00000013978 Astyanax mexicanus ENSAMXG00000013978 I 0.000
ENSBTAP00000034715-D1 Bos grunniens ENSBTAP00000034715-D1 I 0.000
ENSCPOG00000026466 Cavia porcellus ENSCPOG00000026466 I 0.000
ENSCSAG00000003133 Chlorocebus sabaeus ENSCSAG00000003133 I 0.000
ENSCSAG00000003196 Chlorocebus sabaeus ENSCSAG00000003196 I 0.000
ENSFALG00000000667 Ficedula albicollis ENSFALG00000000667 I 0.000
ENSFCAG00000002153 Felis catus ENSFCAG00000002153 I 0.000
ENSFCAG00000028112 Felis catus ENSFCAG00000028112 I 0.000
ENSGMOG00000014154 Gadus morhua ENSGMOG00000014154 I 0.000
ENSGMOG00000015001 Gadus morhua ENSGMOG00000015001 I 0.000
ENSLACG00000002646 Latimeria chalumnae ENSLACG00000002646 I 0.000
ENSLOCG00000012527 Lepisosteus oculatus ENSLOCG00000012527 I 0.000
ENSMEUG00000006640 Macropus eugenii ENSMEUG00000006640 I 0.000
ENSMGAG00000003430 Meleagris gallopavo ENSMGAG00000003430 I 0.000
ENSMODG00000014816 Monodelphis domestica ENSMODG00000014816 I 0.000
ENSMODG00000014836 Monodelphis domestica ENSMODG00000014836 I 0.000
ENSMPUG00000010517 Mustela putorius furo ENSMPUG00000010517 I 0.000
ENSMPUG00000010528 Mustela putorius furo ENSMPUG00000010528 I 0.000
ENSNLEG00000011444 Nomascus leucogenys ENSNLEG00000011444 I 0.000
ENSNLEG00000027072 Nomascus leucogenys ENSNLEG00000027072 I 0.000
ENSOANG00000004051 Ornithorhynchus anatinus ENSOANG00000004051 I 0.000
ENSOANG00000006496 Ornithorhynchus anatinus ENSOANG00000006496 I 0.000
ENSOARG00000000809 Ovis aries ENSOARG00000000809 I 0.000
ENSOARG00000018964 Ovis aries ENSOARG00000018964 I 0.000
ENSONIG00000001131 Oreochromis niloticus ENSONIG00000001131 I 0.000
ENSP00000293328 Macaca fascicularis ENSP00000293328 I 0.000
ENSP00000293328-D1 Bos grunniens ENSP00000293328-D1 I 0.000
ENSP00000400320 Macaca fascicularis ENSP00000400320 I 0.000
ENSPANG00000021452 Papio anubis ENSPANG00000021452 I 0.000
ENSPANG00000021460 Papio anubis ENSPANG00000021460 I 0.000
ENSPFOG00000010905 Poecilia formosa ENSPFOG00000010905 I 0.000
ENSPFOG00000012581 Poecilia formosa ENSPFOG00000012581 I 0.000
ENSPMAG00000009008 Petromyzon marinus ENSPMAG00000009008 I 0.000
ENSPPYG00000008393 Pongo abelii ENSPPYG00000008393 I 0.000
ENSPPYG00000008394 Pongo abelii ENSPPYG00000008394 I 0.000
ENSSARG00000014205 Sorex araneus ENSSARG00000014205 I 0.000
ENSSHAG00000003879 Sarcophilus harrisii ENSSHAG00000003879 I 0.000
ENSSTOG00000006691 Ictidomys tridecemlineatus ENSSTOG00000006691 I 0.000
ENSSTOG00000006713 Ictidomys tridecemlineatus ENSSTOG00000006713 I 0.000
ENSTGUG00000002572 Taeniopygia guttata ENSTGUG00000002572 I 0.000
ENSXMAG00000005165 Xiphophorus maculatus ENSXMAG00000005165 I 0.000
Gfo_R009045 Geospiza fortis Gfo_R009045 I 0.000
Myotis_brandtii_STAT5A_10015329 Myotis brandtii Myotis_brandtii_STAT5A_10015329 I 0.000
Myotis_brandtii_STAT5B_10015330 Myotis brandtii Myotis_brandtii_STAT5B_10015330 I 0.000
Ogr09155 Ophisaurus gracilis Ogr09155 I 0.000
Pvit_13934 Pogona vitticeps Pvit_13934 I 0.000
SNAPOd2T00000256001 Oikopleura dioica SNAPOd2T00000256001 I 0.000
stat5a Danio rerio ENSDARG00000019392 I 0.000
STAT5A Erinaceus europaeus ENSEEUG00000003642 I 0.000
STAT5A Equus caballus ENSECAG00000012328 I 0.000
STAT5A Pan troglodytes ENSPTRG00000009199 I 0.000
STAT5A Homo sapiens ENSG00000126561 D 0.000
Stat5a Rattus norvegicus ENSRNOG00000019496 I 0.000
Stat5a Dipodomys ordii ENSDORG00000000303 I 0.000
STAT5A Sus scrofa ENSSSCG00000017402 I 0.000
STAT5A Cavia porcellus ENSCPOG00000012203 I 0.000
STAT5A Bos taurus ENSBTAG00000009496 I 0.000
stat5a Tetraodon nigroviridis ENSTNIG00000011707 I 0.000
STAT5A Canis familiaris ENSCAFG00000015346 I 0.000
STAT5A Tursiops truncatus ENSTTRG00000007155 I 0.000
stat5a Takifugu rubripes ENSTRUG00000015454 I 0.000
STAT5A Echinops telfairi ENSETEG00000008535 I 0.000
STAT5A Loxodonta africana ENSLAFG00000014055 I 0.000
STAT5A Gorilla gorilla ENSGGOG00000017103 I 0.000
STAT5A Otolemur garnettii ENSOGAG00000001513 I 0.000
STAT5A Ochotona princeps ENSOPRG00000008335 I 0.000
STAT5A Oryctolagus cuniculus ENSOCUG00000023066 I 0.000
stat5a Oryzias latipes ENSORLG00000003961 I 0.000
Stat5a Mus musculus ENSMUSG00000004043 D 0.000
STAT5A Myotis lucifugus ENSMLUG00000026308 I 0.000
STAT5A Macaca mulatta ENSMMUG00000010705 I 0.000
STAT5A Procavia capensis ENSPCAG00000010107 I 0.000
stat5a Gasterosteus aculeatus ENSGACG00000008634 I 0.000
STAT5B Canis familiaris ENSCAFG00000015509 I 0.000
STAT5B Gorilla gorilla ENSGGOG00000008216 I 0.000
STAT5B Bos taurus ENSBTAG00000010125 I 0.000
STAT5B Loxodonta africana ENSLAFG00000014045 I 0.000
STAT5B Echinops telfairi ENSETEG00000008528 I 0.000
Stat5b Mus musculus ENSMUSG00000020919 D 0.000
STAT5B Myotis lucifugus ENSMLUG00000012050 I 0.000
stat5b Xenopus tropicalis XB-GENE-5913743 I 0.000
STAT5B Gallus gallus ENSGALG00000003282 I 0.000
stat5b Danio rerio ENSDARG00000055588 I 0.000
stat5b Gasterosteus aculeatus ENSGACG00000015405 I 0.000
STAT5B Microcebus murinus ENSMICG00000011988 I 0.000
STAT5B Pan troglodytes ENSPTRG00000009198 I 0.000
STAT5B Homo sapiens ENSG00000173757 D 0.000
stat5b Oryzias latipes ENSORLG00000014335 I 0.000
Stat5b Rattus norvegicus ENSRNOG00000019075 I 0.000
STAT5B Equus caballus ENSECAG00000007847 I 0.000
STAT5B Ochotona princeps ENSOPRG00000008312 I 0.000
STAT5B Sus scrofa ENSSSCG00000017406 I 0.000
STAT5B Pteropus vampyrus ENSPVAG00000003876 I 0.000
STAT5B Otolemur garnettii ENSOGAG00000017198 I 0.000
STAT5B Tursiops truncatus ENSTTRG00000006684 I 0.000
STAT5B Oryctolagus cuniculus ENSOCUG00000005078 I 0.000
stat5b.L Xenopus laevis XB-GENE-17341802 I 0.000
stat5b.S Xenopus laevis XB-GENE-5913744 I 0.000