cassava46357.m1 (Manihot esculenta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 cassava46357.m1 T257241_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava46357.m1 MADS box 22 69

Links

Other MADS box family TFs
Other Manihot esculenta TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.854
29693.m002041 Ricinus communis 29693.m002041 N 0.812
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.812
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.792
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.750
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.729
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.729
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.729
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.729
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.729
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.729
29693.m002042 Ricinus communis 29693.m002042 N 0.729
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.729
Cla009921 Citrullus lanatus Cla009921 N 0.729
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.729
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.708
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.708