cassava8711.m1 (Manihot esculenta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 cassava8711.m1 T257247_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava8711.m1 MADS box 15 62

Links

Other MADS box family TFs
Other Manihot esculenta TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_28392 Aegilops tauschii F775_28392 I 0.000
F775_08967 Aegilops tauschii F775_08967 I 0.000
F775_14392 Aegilops tauschii F775_14392 I 0.000
F775_23034 Aegilops tauschii F775_23034 I 0.000
F775_00954 Aegilops tauschii F775_00954 I 0.000
AMTR_s00038p00150140 Amborella trichopoda AMTR_s00038p00150140 I 0.000
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.000
Aquca_005_00025 Aquilegia coerulea Aquca_005_00025 I 0.000
MYB97 Arabidopsis lyrata fgenesh2_kg.7__1539__AT4G26930.1 I 0.000
ATMYB120 Arabidopsis thaliana AT5G55020 I 0.000
MYB97 Arabidopsis thaliana AT4G26930 I 0.000
Bostr.26833s0761 Boechera stricta Bostr.26833s0761 I 0.000
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.000
BRADI1G32720 Brachypodium distachyon BRADI1G32720 I 0.000
Bo9g119060 Brassica oleracea Bo9g119060 I 0.000
Bra012038 Brassica rapa Bra012038 I 0.000
Bra002938 Brassica rapa Bra002938 I 0.000
Cagra.1629s0073 Capsella grandiflora Cagra.1629s0073 I 0.000
Carubv10026070m.g Capsella rubella Carubv10026070m.g I 0.000
evm.TU.supercontig_12.292 Carica papaya evm.TU.supercontig_12.292 I 0.000
Ca_20081 Cicer arietinum Ca_20081 I 0.000
Cla005406 Citrullus lanatus Cla005406 I 0.000
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I 0.000
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I 0.000
Cucsa.060080 Cucumis sativus Cucsa.060080 I 0.000
Eucgr.G03183 Eucalyptus grandis Eucgr.G03183 I 0.000
Thhalv10013018m.g Eutrema salsugineum Thhalv10013018m.g I 0.000
gene03321-v1.0-hybrid Fragaria vesca gene03321-v1.0-hybrid I 0.000
gene03323-v1.0-hybrid Fragaria vesca gene03323-v1.0-hybrid I 0.000
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.000
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.000
GLYMA06G47000 Glycine max GLYMA06G47000 I 0.000
GLYMA08G42920 Glycine max GLYMA08G42920 I 0.000
GLYMA08G42955 Glycine max GLYMA08G42955 I 0.000
GLYMA04G15150 Glycine max GLYMA04G15150 I 0.000
Gorai.007G312700 Gossypium raimondii Gorai.007G312700 I 0.000
Gorai.013G159200 Gossypium raimondii Gorai.013G159200 I 0.000
Gam1 Hordeum vulgare Q96464_HORVU D 0.000
MLOC_6041 Hordeum vulgare MLOC_6041 I 0.000
LPERR06G20610 Leersia perrieri LPERR06G20610 I 0.000
LPERR03G20110 Leersia perrieri LPERR03G20110 I 0.000
LPERR06G17110 Leersia perrieri LPERR06G17110 N 0.000
Lus10035275.g Linum usitatissimum Lus10035275.g I 0.000
Lus10021539.g Linum usitatissimum Lus10021539.g I 0.000
Lus10040063.g Linum usitatissimum Lus10040063.g I 0.000
Lus10027189.g Linum usitatissimum Lus10027189.g I 0.000
Lus10036103.g Linum usitatissimum Lus10036103.g I 0.000
Lus10026787.g Linum usitatissimum Lus10026787.g I 0.000
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.000
LjT02G13.10.nc Lotus japonicus LjT02G13.10.nc I 0.000
MDP0000308617 Malus domestica MDP0000308617 I 0.000
MDP0000176798 Malus domestica MDP0000176798 I 0.000
MDP0000151688 Malus domestica MDP0000151688 I 0.000
MDP0000175835 Malus domestica MDP0000175835 I 0.000
MDP0000147309 Malus domestica MDP0000147309 I 0.000
MDP0000179306 Malus domestica MDP0000179306 I 0.000
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.000
MTR_1g021230 Medicago truncatula MTR_1g021230 I 0.000
MTR_8g042410 Medicago truncatula MTR_8g042410 I 0.000
mgf010934m Mimulus guttatus mgf010934m I 0.000
mgf019173m Mimulus guttatus mgf019173m I 0.000
mgf020500m Mimulus guttatus mgf020500m I 0.000
mgf002965m Mimulus guttatus mgf002965m I 0.000
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I 0.000
GSMUA_AchrUn_randomG15100_001 Musa acuminata GSMUA_AchrUn_randomG15100_001 I 0.000
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.000
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.000
OBART01G34660 Oryza barthii OBART01G34660 I 0.000
OBART03G24120 Oryza barthii OBART03G24120 I 0.000
OB03G32840 Oryza brachyantha OB03G32840 I 0.000
OB01G43550 Oryza brachyantha OB01G43550 I 0.000
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I 0.000
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I 0.000
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.000
OGLUM06G26120 Oryza glumaepatula OGLUM06G26120 I 0.000
GAM1 Oryza indica BGIOSGA004670 I 0.000
BGIOSGA020673 Oryza indica BGIOSGA020673 I 0.000
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.000
OLONG_025057 Oryza longistaminata OLONG_025057 I 0.000
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.000
OMERI03G21920 Oryza meridionalis OMERI03G21920 I 0.000
OMERI06G24960 Oryza meridionalis OMERI06G24960 I 0.000
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.000
ONIVA04G15310 Oryza nivara ONIVA04G15310 I 0.000
OPUNC06G22490 Oryza punctata OPUNC06G22490 I 0.000
OPUNC03G22220 Oryza punctata OPUNC03G22220 I 0.000
ORUFI06G26670 Oryza rufipogon ORUFI06G26670 I 0.000
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I 0.000
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.000
OS03G0578900 Oryza sativa OS03G0578900 I 0.000
GAMYB Oryza sativa OS01G0812000 I 0.000
OS06G0679400 Oryza sativa OS06G0679400 I 0.000
Pavir.Da00077 Panicum virgatum Pavir.Da00077 I 0.000
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I 0.000
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.000
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.000
Pavir.Db00593 Panicum virgatum Pavir.Db00593 I 0.000
Pm016605 Prunus mume Pm016605 I 0.000
Pm015094 Prunus mume Pm015094 I 0.000
PRUPE_ppa022465mg Prunus persica PRUPE_ppa022465mg I 0.000
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.000
PRUPE_ppa017451mg Prunus persica PRUPE_ppa017451mg I 0.000
PRUPE_ppa019943mg Prunus persica PRUPE_ppa019943mg I 0.000
SELMODRAFT_117411 Selaginella moellendorffii SELMODRAFT_117411 I 0.000
SELMODRAFT_128781 Selaginella moellendorffii SELMODRAFT_128781 I 0.000
SELMODRAFT_81112 Selaginella moellendorffii SELMODRAFT_81112 I 0.000
SELMODRAFT_127220 Selaginella moellendorffii SELMODRAFT_127220 I 0.000
SELMODRAFT_98669 Selaginella moellendorffii SELMODRAFT_98669 I 0.000
SELMODRAFT_84369 Selaginella moellendorffii SELMODRAFT_84369 I 0.000
Si000907m.g Setaria italica Si000907m.g I 0.000
Si006555m.g Setaria italica Si006555m.g I 0.000
Si039629m.g Setaria italica Si039629m.g I 0.000
Solyc07g052300.2 Solanum lycopersicum Solyc07g052300.2 I 0.000
PGSC0003DMG400028949 Solanum tuberosum PGSC0003DMG400028949 I 0.000
PGSC0003DMG400013897 Solanum tuberosum PGSC0003DMG400013897 I 0.000
Sb03g037680 Sorghum bicolor Sb03g037680 I 0.000
Sb10g027280 Sorghum bicolor Sb10g027280 I 0.000
Sb01g015920 Sorghum bicolor Sb01g015920 I 0.000
Traes_6AS_5562B97F7 Triticum aestivum Traes_6AS_5562B97F7 I 0.000
Traes_7AL_0AD4A7A87 Triticum aestivum Traes_7AL_0AD4A7A87 I 0.000
Traes_7DL_FAF2AE9FB Triticum aestivum Traes_7DL_FAF2AE9FB I 0.000
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.000
Traes_6DS_A0EC5D808 Triticum aestivum Traes_6DS_A0EC5D808 I 0.000
TRIUR3_20797 Triticum urartu TRIUR3_20797 I 0.000
TRIUR3_22706 Triticum urartu TRIUR3_22706 I 0.000
TRIUR3_17146 Triticum urartu TRIUR3_17146 I 0.000
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.000
TRIUR3_15006 Triticum urartu TRIUR3_15006 I 0.000
VIT_13s0067g01630 Vitis vinifera VIT_13s0067g01630 I 0.000
MYB101 Vitis vinifera VIT_12s0059g00700 I 0.000
GRMZM2G070523 Zea mays GRMZM2G070523 I 0.000
AC217264.3_FG005 Zea mays AC217264.3_FG005 I 0.000
GRMZM2G161512 Zea mays GRMZM2G161512 N 0.000
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.000
GRMZM2G343068 Zea mays GRMZM2G343068 N 0.000