Cucsa.047600 (Cucumis sativus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cucsa.047600 T257261_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.047600.1 MADS box 27 74

Links

Other MADS box family TFs
Other Cucumis sativus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla009921 Citrullus lanatus Cla009921 N 1.000
Pm008734 Prunus mume Pm008734 N 0.896
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.896
29693.m002042 Ricinus communis 29693.m002042 N 0.875
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.875
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.854
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.854
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.833
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.833
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.833
29693.m002041 Ricinus communis 29693.m002041 N 0.833
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.833
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.833
Eucgr.E02870 Eucalyptus grandis Eucgr.E02870 N 0.812
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.812
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.812
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.812
Eucgr.L01236 Eucalyptus grandis Eucgr.L01236 N 0.771
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.771
Eucgr.E02872 Eucalyptus grandis Eucgr.E02872 N 0.771
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.750
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.750
Eucgr.E02829 Eucalyptus grandis Eucgr.E02829 N 0.750
Eucgr.E02827 Eucalyptus grandis Eucgr.E02827 N 0.750
Eucgr.E02824 Eucalyptus grandis Eucgr.E02824 N 0.750
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.750
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.750
cassava46357.m1 Manihot esculenta cassava46357.m1 N 0.729
Gorai.009G284300 Gossypium raimondii Gorai.009G284300 N 0.729
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.729
MDP0000696333 Malus domestica MDP0000696333 N 0.729
orange1.1g038327m.g Citrus sinensis orange1.1g038327m.g N 0.722
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
orange1.1g047467m.g Citrus sinensis orange1.1g047467m.g N 0.708
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.708
Gorai.010G132900 Gossypium raimondii Gorai.010G132900 N 0.708
gene18094-v1.0-hybrid Fragaria vesca gene18094-v1.0-hybrid N 0.708
Gorai.010G133300 Gossypium raimondii Gorai.010G133300 N 0.708
Gorai.010G132700 Gossypium raimondii Gorai.010G132700 N 0.708
Pm030654 Prunus mume Pm030654 N 0.708
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.708
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
Ciclev10006803m.g Citrus clementina Ciclev10006803m.g N 0.708
Ciclev10006740m.g Citrus clementina Ciclev10006740m.g N 0.708
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
F775_04223 Aegilops tauschii F775_04223 I 0.708