Cucsa.212320 (Cucumis sativus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cucsa.212320 T257279_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.212320.1 MADS box 10 57

Links

Other MADS box family TFs
Other Cucumis sativus TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla019897 Citrullus lanatus Cla019897 N 0.979
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.833
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.833
TCM_029518 Theobroma cacao TCM_029518 I 0.812
29693.m002039 Ricinus communis 29693.m002039 I 0.812
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.812
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.792
Pm030655 Prunus mume Pm030655 I 0.792
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.792
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.792
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.771
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.771
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.771
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.771
MDP0000274606 Malus domestica MDP0000274606 N 0.771
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.771
AGL29 Arabidopsis thaliana AT2G34440 I 0.729
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.729
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.729
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.729
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.729
MDP0000120467 Malus domestica MDP0000120467 N 0.729
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.729
Ca_05023 Cicer arietinum Ca_05023 I 0.729
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.729
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.729
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.708
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.708
Bo4g182590 Brassica oleracea Bo4g182590 I 0.708
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.708
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.708
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
Bra021910 Brassica rapa Bra021910 I 0.708
Lus10011787.g Linum usitatissimum Lus10011787.g N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.708
Ca_24185 Cicer arietinum Ca_24185 I 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.708
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.708
Lus10016563.g Linum usitatissimum Lus10016563.g N 0.708