Cucsa.342610 (Cucumis sativus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Cucsa.342610 T257295_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.342610.1 MADS box 22 69

Links

Other MADS box family TFs
Other Cucumis sativus TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29613.m000367 Ricinus communis 29613.m000367 N 0.729
30099.m001672 Ricinus communis 30099.m001672 N 0.708
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Bo3g009340 Brassica oleracea Bo3g009340 I 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Bra006214 Brassica rapa Bra006214 I 0.708
Bra026764 Brassica rapa Bra026764 N 0.729
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Cagra.5588s0006 Capsella grandiflora Cagra.5588s0006 I 0.708
Carubv10002596m.g Capsella rubella Carubv10002596m.g I 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
Ca_04658 Cicer arietinum Ca_04658 N 0.771
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Ca_18845 Cicer arietinum Ca_18845 N 0.729
Ca_26354 Cicer arietinum Ca_26354 N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.729
chr5.LjT25B19.200.nd Lotus japonicus chr5.LjT25B19.200.nd N 0.708
Ciclev10030327m.g Citrus clementina Ciclev10030327m.g N 0.750
Ciclev10032637m.g Citrus clementina Ciclev10032637m.g N 0.729
Cla010744 Citrullus lanatus Cla010744 N 0.979
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.729
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.708
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.708
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.708
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.729
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.708
evm.TU.supercontig_20.85 Carica papaya evm.TU.supercontig_20.85 N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.729
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.729
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.729
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.729
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.729
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.708
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.708
gene00615-v1.0-hybrid Fragaria vesca gene00615-v1.0-hybrid N 0.792
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I 0.708
gene15090-v1.0-hybrid Fragaria vesca gene15090-v1.0-hybrid N 0.729
gene30741-v1.0-hybrid Fragaria vesca gene30741-v1.0-hybrid I 0.702
GLYMA17G01771 Glycine max GLYMA17G01771 N 0.812
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
GLYMA20G27361 Glycine max GLYMA20G27361 N 0.792
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.708
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708
MDP0000135652 Malus domestica MDP0000135652 I 0.708
MDP0000144516 Malus domestica MDP0000144516 I 0.708
MDP0000237091 Malus domestica MDP0000237091 I 0.750
mgf017842m Mimulus guttatus mgf017842m N 0.708
mgf020533m Mimulus guttatus mgf020533m N 0.708
mgf021403m Mimulus guttatus mgf021403m N 0.729
mgf022403m Mimulus guttatus mgf022403m N 0.708
mgf023207m Mimulus guttatus mgf023207m N 0.708
mgf024490m Mimulus guttatus mgf024490m N 0.708
mgf025566m Mimulus guttatus mgf025566m N 0.708
MTR_2g105290 Medicago truncatula MTR_2g105290 N 0.708
MTR_4g036915 Medicago truncatula MTR_4g036915 I 0.729
MTR_4g127140 Medicago truncatula MTR_4g127140 N 0.750
MTR_7g028448 Medicago truncatula MTR_7g028448 I 0.729
orange1.1g045249m.g Citrus sinensis orange1.1g045249m.g N 0.750
PGSC0003DMG400039595 Solanum tuberosum PGSC0003DMG400039595 N 0.708
Pm017638 Prunus mume Pm017638 I 0.708
Pm021018 Prunus mume Pm021018 N 0.729
Pm021070 Prunus mume Pm021070 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
POPTR_0003s16840 Populus trichocarpa POPTR_0003s16840 I 0.708
POPTR_0003s16870 Populus trichocarpa POPTR_0003s16870 I 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
PRUPE_ppa024464mg Prunus persica PRUPE_ppa024464mg I 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.729
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.729
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
Solyc10g080030.1 Solanum lycopersicum Solyc10g080030.1 I 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
TCM_006325 Theobroma cacao TCM_006325 N 0.750
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.708
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.708
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.708
VIT_07s0005g06590 Vitis vinifera VIT_07s0005g06590 N 0.729
VIT_10s0003g03970 Vitis vinifera VIT_10s0003g03970 N 0.750